RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 APMAPQ9HDC9 416 aa11.46□□□□□ -0.57
CMTM1-216ENST00000533078 VPS18Q9P253 973 aa11.46□□□□□ -0.57
CMTM1-216ENST00000533078 ST14Q9Y5Y6 855 aa11.46□□□□□ -0.57
CMTM1-216ENST00000533078 KCNMB2Q9Y691 235 aa11.46□□□□□ -0.57
CMTM1-216ENST00000533078 USP9XQ93008 2570 aaPredicted RBP11.46□□□□□ -0.58
CMTM1-216ENST00000533078 TTLL8A6PVC2 850 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 TMCO5BA8MYB1 307 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 EPHB6O15197 1021 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 RASSF9O75901 435 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 DLGAP3O95886 979 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 MT-ND3P03897 115 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 KRT7P08729 469 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 ANKRD34CP0C6C1 535 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 MIPP30301 263 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 CASP14P31944 242 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 MLLT10P55197 1068 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 MAXP61244 160 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 OGDHQ02218 1023 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 UBXN1Q04323 297 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 MAMLD1Q13495 774 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 ERV3-1Q14264 604 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 IL11RAQ14626 422 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 IYDQ6PHW0 289 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 LYSMD3Q7Z3D4 306 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 RAVER1Q8IY67 606 aaKnown RBP11.45□□□□□ -0.58
CMTM1-216ENST00000533078 CBARPQ8N350 705 aaPredicted RBP11.45□□□□□ -0.58
CMTM1-216ENST00000533078 ENOX1Q8TC92 643 aaKnown RBP11.45□□□□□ -0.58
CMTM1-216ENST00000533078 FNIP1Q8TF40 1166 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 SPRY4Q9C004 299 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 POLR1EQ9GZS1 481 aaKnown RBP11.45□□□□□ -0.58
CMTM1-216ENST00000533078 CWC15Q9P013 229 aaKnown RBP11.45□□□□□ -0.58
CMTM1-216ENST00000533078 CPNE7Q9UBL6 633 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 PLEKHB1Q9UF11 243 aaPredicted RBP11.45□□□□□ -0.58
CMTM1-216ENST00000533078 CROTQ9UKG9 612 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 PPIL1Q9Y3C6 166 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 SCINQ9Y6U3 715 aa11.45□□□□□ -0.58
CMTM1-216ENST00000533078 PRRC2CQ9Y520 2896 aaKnown RBP11.45□□□□□ -0.58
CMTM1-216ENST00000533078 PIPSLA2A3N6 862 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 LILRA5A6NI73 299 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 ENO4A6NNW6 628 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 TOX3O15405 576 aaPredicted RBP11.44□□□□□ -0.58
CMTM1-216ENST00000533078 MTA2O94776 668 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 ACP5P13686 325 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 F3P13726 295 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 AMD1P17707 334 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 CDK11BP21127 795 aaKnown RBP11.44□□□□□ -0.58
CMTM1-216ENST00000533078 CES1P23141 567 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 DPYSQ14117 519 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 ATP1A1-AS1Q5TC04 95 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 LRRC49Q8IUZ0 686 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 GALNT11Q8NCW6 608 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 CCHCR1Q8TD31 782 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 SCAMP4Q969E2 229 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 COX14Q96I36 57 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 RIOK2Q9BVS4 552 aaKnown RBP11.44□□□□□ -0.58
CMTM1-216ENST00000533078 TWSG1Q9GZX9 223 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 OSGEPL1Q9H4B0 414 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 MRPL47Q9HD33 250 aaKnown RBP11.44□□□□□ -0.58
CMTM1-216ENST00000533078 NT5MQ9NPB1 228 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 TBC1D29Q9UFV1 150 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 LNPEPQ9UIQ6 1025 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 G3BP2Q9UN86 482 aaKnown RBP11.44□□□□□ -0.58
CMTM1-216ENST00000533078 KCNK6Q9Y257 313 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 SIK3Q9Y2K2 1263 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 TTLL3Q9Y4R7 772 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 MRPS18BQ9Y676 258 aaKnown RBP11.44□□□□□ -0.58
CMTM1-216ENST00000533078 ICE1Q9Y2F5 2266 aa11.44□□□□□ -0.58
CMTM1-216ENST00000533078 MN1Q10571 1320 aaPredicted RBP11.43□□□□□ -0.58
CMTM1-216ENST00000533078 A0A0J9YYE9 177 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 CDC14CA4D256 554 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 MAFKO60675 156 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 NDUFA10O95299 355 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 SOD1P00441 154 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 VIPP01282 170 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 TRBC1P01850 177 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 NR1D1P20393 614 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 GARSP41250 739 aaKnown RBP11.43□□□□□ -0.58
CMTM1-216ENST00000533078 PMS2P54278 862 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 PTSQ03393 145 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 BOLA3Q53S33 107 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 CDKAL1Q5VV42 579 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 PLEKHA7Q6IQ23 1121 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 PGBD5Q8N414 524 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 GALNT6Q8NCL4 622 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 CPT1CQ8TCG5 803 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 PIH1D2Q8WWB5 315 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 HSPH1Q92598 858 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 TRIM11Q96F44 468 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 C9orf72Q96LT7 481 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 NSMCE3Q96MG7 304 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 TGM7Q96PF1 710 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 OR6C1Q96RD1 312 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 PEBP4Q96S96 227 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 TBC1D10AQ9BXI6 508 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.43□□□□□ -0.58
CMTM1-216ENST00000533078 PKD2L2Q9NZM6 624 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 PADI1Q9ULC6 663 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 PRKAB1Q9Y478 270 aa11.43□□□□□ -0.58
CMTM1-216ENST00000533078 OAS3Q9Y6K5 1087 aaKnown RBP11.43□□□□□ -0.58
CMTM1-216ENST00000533078 CREBBPQ92793 2442 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms