RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 HACD3Q9P035 362 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 TAAR2Q9P1P5 351 aa26.16■■□□□ 1.78
TSPAN4-217ENST00000527644 SRRM3A6NNA2 597 aaPredicted RBP26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 AURKAO14965 403 aa26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 CSO75390 466 aaKnown RBP26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 ATP1A1P05023 1023 aaKnown RBP26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 GLB1P16278 677 aa26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 AK4P27144 223 aaPredicted RBP26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 HMGCLP35914 325 aa26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 KLF1Q13351 362 aaPredicted RBP26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 CERCAMQ5T4B2 595 aa26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 ALS2CLQ60I27 953 aa26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 MARK2Q7KZI7 788 aaKnown RBP26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 TRAM1L1Q8N609 369 aa26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 GRAMD1AQ96CP6 724 aa26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 SPATA13Q96N96 652 aa26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 RMI1Q9H9A7 625 aa26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 AAR2Q9Y312 384 aaKnown RBP26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 OAS3Q9Y6K5 1087 aaKnown RBP26.15■■□□□ 1.78
TSPAN4-217ENST00000527644 ANKRD11Q6UB99 2663 aaPredicted RBP26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 DMXL2Q8TDJ6 3036 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 FGF1P05230 155 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 CCDC175P0C221 793 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 PNLIPP16233 465 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 BPIP17213 487 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 CHRNA4P43681 627 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 LRP8Q14114 963 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 HLTFQ14527 1009 aaKnown RBP eCLIP26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 PRPSAP1Q14558 356 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 ZNF569Q5MCW4 686 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 SLC30A9Q6PML9 568 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 RBM44Q6ZP01 1051 aaKnown RBP26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 ZNF662Q6ZS27 426 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 ZDHHC1Q8WTX9 485 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 PPP1R2P1Q96PQ5 205 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 PLEKHG4BQ96PX9 1271 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 GORASP1Q9BQQ3 440 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 APPL1Q9UKG1 709 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 ST14Q9Y5Y6 855 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 AK5Q9Y6K8 562 aa26.14■■□□□ 1.78
TSPAN4-217ENST00000527644 ARHGEF17Q96PE2 2063 aaPredicted RBP26.14■■□□□ 1.77
TSPAN4-217ENST00000527644 APC2O95996 2303 aa26.14■■□□□ 1.77
TSPAN4-217ENST00000527644 ACACAQ13085 2346 aa26.14■■□□□ 1.77
TSPAN4-217ENST00000527644 DNAJC6O75061 913 aa26.13■■□□□ 1.77
TSPAN4-217ENST00000527644 ISXQ2M1V0 245 aa26.13■■□□□ 1.77
TSPAN4-217ENST00000527644 ZDHHC20Q5W0Z9 365 aa26.13■■□□□ 1.77
TSPAN4-217ENST00000527644 C17orf82Q86X59 251 aaPredicted RBP26.13■■□□□ 1.77
TSPAN4-217ENST00000527644 SFTPA2Q8IWL1 248 aa26.13■■□□□ 1.77
TSPAN4-217ENST00000527644 TTC30BQ8N4P2 665 aa26.13■■□□□ 1.77
TSPAN4-217ENST00000527644 ZNHIT2Q9UHR6 403 aa26.13■■□□□ 1.77
TSPAN4-217ENST00000527644 RABGEF1Q9UJ41 708 aa26.13■■□□□ 1.77
TSPAN4-217ENST00000527644 PLEKHM1Q9Y4G2 1056 aa26.13■■□□□ 1.77
TSPAN4-217ENST00000527644 PCDHB1Q9Y5F3 818 aa26.13■■□□□ 1.77
TSPAN4-217ENST00000527644 C5orf60A6NFR6 353 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 NTN3O00634 580 aaPredicted RBP26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 NUDT21O43809 227 aaKnown RBP26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 NRDCO43847 1150 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 SLC25A14O95258 325 aaPredicted RBP26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 AGTP01019 485 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 PSMB4P28070 264 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 ACTR1BP42025 376 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 ACTR1AP61163 376 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 SPIDRQ14159 915 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 CCDC110Q8TBZ0 833 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 BLOC1S5Q8TDH9 187 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 CARD9Q9H257 536 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 TRIM39Q9HCM9 518 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 BPIFA1Q9NP55 256 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 LRIT1Q9P2V4 623 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 RNF215Q9Y6U7 377 aa26.12■■□□□ 1.77
TSPAN4-217ENST00000527644 SEL1L2Q5TEA6 688 aa26.11■■□□□ 1.77
TSPAN4-217ENST00000527644 RANBP10Q6VN20 620 aa26.11■■□□□ 1.77
TSPAN4-217ENST00000527644 GLT6D1Q7Z4J2 308 aa26.11■■□□□ 1.77
TSPAN4-217ENST00000527644 DTX3LQ8TDB6 740 aa26.11■■□□□ 1.77
TSPAN4-217ENST00000527644 GLYATL1Q969I3 302 aa26.11■■□□□ 1.77
TSPAN4-217ENST00000527644 FICDQ9BVA6 458 aa26.11■■□□□ 1.77
TSPAN4-217ENST00000527644 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.11■■□□□ 1.77
TSPAN4-217ENST00000527644 IL17CQ9P0M4 197 aa26.11■■□□□ 1.77
TSPAN4-217ENST00000527644 R3HDM2Q9Y2K5 976 aaKnown RBP26.11■■□□□ 1.77
TSPAN4-217ENST00000527644 TCRBV7S2A1N4TA0A589 114 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 NUAK1O60285 661 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 USP12O75317 370 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 ADRA1AP35348 466 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 CCL7P80098 99 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 CCZ1BP86790 482 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 CCZ1P86791 482 aaPredicted RBP26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 MEI1Q5TIA1 1274 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 CCNJLQ8IV13 435 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 SLC35B2Q8TB61 432 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 ALS2CR12Q96Q35 445 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 LRRN3Q9H3W5 708 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 SYNDIG1Q9H7V2 258 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 LZTFL1Q9NQ48 299 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 ATXN10Q9UBB4 475 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 ZZEF1O43149 2961 aa26.1■■□□□ 1.77
TSPAN4-217ENST00000527644 GPR89AB7ZAQ6 455 aa26.09■■□□□ 1.77
TSPAN4-217ENST00000527644 CASC3O15234 703 aaKnown RBP26.09■■□□□ 1.77
TSPAN4-217ENST00000527644 PPFIA2O75334 1257 aa26.09■■□□□ 1.77
TSPAN4-217ENST00000527644 ECEL1O95672 775 aa26.09■■□□□ 1.77
TSPAN4-217ENST00000527644 RPLP0P05388 317 aaKnown RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms