RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PIGAP37287 484 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 NAP1L1P55209 391 aaKnown RBP3.95□□□□□ -1.78
CD44-219ENST00000525685 RIPK4P57078 832 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 OLR1P78380 273 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 SETQ01105 290 aaPredicted RBP3.95□□□□□ -1.78
CD44-219ENST00000525685 TRAF2Q12933 501 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 GRIK3Q13003 919 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 MAMLD1Q13495 774 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 DRAP1Q14919 205 aaPredicted RBP3.95□□□□□ -1.78
CD44-219ENST00000525685 WDR78Q5VTH9 848 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 TXNDC8Q6A555 127 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 ZNF790Q6PG37 636 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 NEK10Q6ZWH5 1172 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 TMTC3Q6ZXV5 915 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 SHFQ7M4L6 423 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 DSELQ8IZU8 1212 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 TTC5Q8N0Z6 440 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 FRMD1Q8N878 549 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 FAM149B1Q96BN6 582 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 INTS12Q96CB8 462 aaKnown RBP3.95□□□□□ -1.78
CD44-219ENST00000525685 URB1-AS1Q96HZ7 61 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 MMTAG2Q9BU76 263 aaKnown RBP3.95□□□□□ -1.78
CD44-219ENST00000525685 MSTO1Q9BUK6 570 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 NDST4Q9H3R1 872 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 GPR108Q9NPR9 543 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 EIF2B3Q9NR50 452 aaKnown RBP3.95□□□□□ -1.78
CD44-219ENST00000525685 SLC6A13Q9NSD5 602 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 EHD2Q9NZN4 543 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 DLGAP2Q9P1A6 1054 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 ERVK-11Q9UQG0 969 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 KCNE2Q9Y6J6 123 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 KDM3AQ9Y4C1 1321 aa3.95□□□□□ -1.78
CD44-219ENST00000525685 MYH14Q7Z406 1995 aaKnown RBP3.94□□□□□ -1.78
CD44-219ENST00000525685 A0A087X0M5 115 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 A0A1B0GX30 115 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 NPIPB15A6NHN6 443 aaPredicted RBP3.94□□□□□ -1.78
CD44-219ENST00000525685 NPIPB11E5RHQ5 1161 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 CCER2I3L3R5 266 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 LDLRAD4O15165 306 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 BAIAP3O94812 1187 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 VNN2O95498 520 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 LCATP04180 440 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 CLEC3BP05452 202 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 MMP2P08253 660 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 HOXC6P09630 235 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 IL7RP16871 459 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 BSGP35613 385 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 RFX5P48382 616 aaPredicted RBP3.94□□□□□ -1.78
CD44-219ENST00000525685 CXCR3P49682 368 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 EFNA5P52803 228 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 CTTNQ14247 550 aaKnown RBP3.94□□□□□ -1.78
CD44-219ENST00000525685 PLCB4Q15147 1175 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 HLFQ16534 295 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 COL28A1Q2UY09 1125 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 FBXO46Q6PJ61 603 aaPredicted RBP3.94□□□□□ -1.78
CD44-219ENST00000525685 NOXA1Q86UR1 476 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 FAM9BQ8IZU0 186 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 ZBTB2Q8N680 514 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 BEST2Q8NFU1 509 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 B4GALNT2Q8NHY0 566 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 ARRDC2Q8TBH0 407 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 POMGNT1Q8WZA1 660 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 ERGIC1Q969X5 290 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 PABPC5Q96DU9 382 aaKnown RBP3.94□□□□□ -1.78
CD44-219ENST00000525685 MTBPQ96DY7 904 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 HARBI1Q96MB7 349 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 KXD1Q9BQD3 176 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 SEZ6LQ9BYH1 1024 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 FTOQ9C0B1 505 aaKnown RBP eCLIP3.94□□□□□ -1.78
CD44-219ENST00000525685 MAF1Q9H063 256 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 MIS18AQ9NYP9 233 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 FBXO9Q9UK97 447 aaPredicted RBP3.94□□□□□ -1.78
CD44-219ENST00000525685 INTS6Q9UL03 887 aaKnown RBP3.94□□□□□ -1.78
CD44-219ENST00000525685 SOS1Q07889 1333 aaPredicted RBP3.94□□□□□ -1.78
CD44-219ENST00000525685 CNTNAP2Q9UHC6 1331 aa3.94□□□□□ -1.78
CD44-219ENST00000525685 A0A0U1RQF3 1178 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 FAM237BA0A1B0GVD1 139 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 HMGB1P1B2RPK0 211 aaPredicted RBP3.93□□□□□ -1.78
CD44-219ENST00000525685 GTPBP1O00178 669 aaKnown RBP3.93□□□□□ -1.78
CD44-219ENST00000525685 AP3D1O14617 1153 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 KCNJ13O60928 360 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 ZBED4O75132 1171 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 CH25HO95992 272 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 GPTP24298 496 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 PSMA4P25789 261 aaKnown RBP3.93□□□□□ -1.78
CD44-219ENST00000525685 CHATP28329 748 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 HOXA11P31270 313 aaPredicted RBP3.93□□□□□ -1.78
CD44-219ENST00000525685 CDAP32320 146 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 CRKLP46109 303 aaKnown RBP3.93□□□□□ -1.78
CD44-219ENST00000525685 PIP4K2AP48426 406 aaPredicted RBP3.93□□□□□ -1.78
CD44-219ENST00000525685 AMTP48728 403 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 ADORA2A-AS1P86434 159 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 NAE1Q13564 534 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 FGFBP1Q14512 234 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 HNF4GQ14541 408 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 MED22Q15528 200 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 TAF7Q15545 349 aaPredicted RBP3.93□□□□□ -1.78
CD44-219ENST00000525685 ZSCAN23Q3MJ62 389 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 MMEL1Q495T6 779 aa3.93□□□□□ -1.78
CD44-219ENST00000525685 TDRD12Q587J7 1177 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms