RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 COL6A3P12111 3177 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 RANBP2P49792 3224 aaKnown RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 TRBC2A0A5B9 178 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 OR2A25A4D2G3 310 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 KCNJ18B7U540 433 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 TEX22C9J3V5 150 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 K7EPI3 171 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 PGRMC2O15173 223 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CD3EAPO15446 510 aaKnown RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 CA12O43570 354 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 RGS10O43665 173 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 VPS4BO75351 444 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 TOMM40O96008 361 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CHEK2O96017 543 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 ABCB1P08183 1280 aaPredicted RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 HMOX1P09601 288 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CYP2C9P11712 490 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 FDPSP14324 419 aaKnown RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 CHRM3P20309 590 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 TNFRSF1BP20333 461 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CCR10P46092 362 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 GMPSP49915 693 aaPredicted RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 LIG4P49917 911 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 EIF3BP55884 814 aaKnown RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 HUNKP57058 714 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 LILRA4P59901 499 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CYP4F2P78329 520 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CBX3Q13185 183 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 ITGA7Q13683 1181 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 PTK6Q13882 451 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 KCNJ12Q14500 433 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CLCA4Q14CN2 919 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 MTHFSDQ2M296 383 aaKnown RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 SHROOM1Q2M3G4 852 aaPredicted RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 MGAT5BQ3V5L5 792 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 TBRG1Q3YBR2 411 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 NHSL2Q5HYW2 709 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 GLRA4Q5JXX5 417 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 C10orf25Q5T742 122 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 KIAA0930Q6ICG6 404 aaPredicted RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 MTHFD1LQ6UB35 978 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CLEC17AQ6ZS10 378 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 USP50Q70EL3 339 aaPredicted RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 MOB2Q70IA6 237 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CTU1Q7Z7A3 348 aaKnown RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 ADHFE1Q8IWW8 467 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 SYCP3Q8IZU3 236 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CNBD1Q8NA66 436 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 SETD6Q8TBK2 473 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 ZFAND2BQ8WV99 257 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 KCNE4Q8WWG9 221 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 THOC3Q96J01 351 aaKnown RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 C1orf74Q96LT6 269 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 SRSF8Q9BRL6 282 aaKnown RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 PAAF1Q9BRP4 392 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 SPXQ9BT56 116 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.38□□□□□ -1.71
PCM1-223ENST00000524356 CTDSP1Q9GZU7 261 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CLPBQ9H078 707 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 FANCFQ9NPI8 374 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 SIRT3Q9NTG7 399 aaPredicted RBP4.38□□□□□ -1.71
PCM1-223ENST00000524356 DLL3Q9NYJ7 618 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 MPP6Q9NZW5 540 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CTNNA3Q9UI47 895 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CD207Q9UJ71 328 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 CDH22Q9UJ99 828 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 LAMP5Q9UJQ1 280 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 USP22Q9UPT9 525 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 LIPT1Q9Y234 373 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 TRIM17Q9Y577 477 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 PCDHA10Q9Y5I2 948 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 AP1M2Q9Y6Q5 423 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 KIF24Q5T7B8 1368 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 TJP1Q07157 1748 aa4.38□□□□□ -1.71
PCM1-223ENST00000524356 BRCA2P51587 3418 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 TEX13CA0A0J9YWL9 993 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 A0A1W2PRV1 198 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 MBD3L5A6NJ08 208 aaPredicted RBP4.37□□□□□ -1.71
PCM1-223ENST00000524356 OR6C76A6NM76 312 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 C4orf47A7E2U8 309 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 YDJCA8MPS7 323 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 DNM1LO00429 736 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 STX6O43752 255 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 SMPD2O60906 423 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 RECQL5O94762 991 aaPredicted RBP4.37□□□□□ -1.71
PCM1-223ENST00000524356 SLCO2B1O94956 709 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 NXPH3O95157 252 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 PNPP00491 289 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 CCDC159P0C7I6 412 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 LYL1P12980 280 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 COX7A2P14406 83 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 THBS4P35443 961 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 PRPHP41219 470 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 ARFIP1P53367 373 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 PMS2P54278 862 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 EEFSECP57772 596 aaKnown RBP4.37□□□□□ -1.71
PCM1-223ENST00000524356 EFNB1P98172 346 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 TMED1Q13445 227 aa4.37□□□□□ -1.71
PCM1-223ENST00000524356 SNTB1Q13884 538 aaKnown RBP4.37□□□□□ -1.71
PCM1-223ENST00000524356 TUBB2AQ13885 445 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms