RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 TBXAS1P24557 533 aaPredicted RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 CCNE1P24864 410 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 PRCPP42785 496 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 SLC1A4P43007 532 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 RANBP1P43487 201 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 PSMD7P51665 324 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 STX17P56962 302 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 FOXL2P58012 376 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 FAM3BP58499 235 aaPredicted RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 SF3A3Q12874 501 aaKnown RBP eCLIP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 SNX1Q13596 522 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 SEMA3AQ14563 771 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 PLCB4Q15147 1175 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 KRT31Q15323 416 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 ODF3L2Q3SX64 289 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 ARL13AQ5H913 290 aaPredicted RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 TCP11X2Q5H9J9 407 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 HYIQ5T013 277 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 C10orf76Q5T2E6 689 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 FKBP1CQ5VVH2 108 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 TMEM88Q6PEY1 159 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 SLC30A9Q6PML9 568 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 ARMC9Q7Z3E5 817 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 TMTC1Q8IUR5 882 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 PAQR4Q8N4S7 273 aaPredicted RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 CEP112Q8N8E3 955 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 SMYD1Q8NB12 490 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 NEK9Q8TD19 979 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 STYXQ8WUJ0 223 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 TMEM174Q8WUU8 243 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 HMGB4Q8WW32 186 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 LPAR1Q92633 364 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 STAMQ92783 540 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 KAT2AQ92830 837 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 P2RX5Q93086 422 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 PPP1R14BQ96C90 147 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 ZBTB10Q96DT7 871 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 TMEM41AQ96HV5 264 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 RBM41Q96IZ5 413 aaKnown RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 RSRC1Q96IZ7 334 aaKnown RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 ADAD1Q96M93 576 aaKnown RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 SCLT1Q96NL6 688 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 CAMK1GQ96NX5 476 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 ELAC2Q9BQ52 826 aaKnown RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 WDR83Q9BRX9 315 aaKnown RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 MECRQ9BV79 373 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 NUP58Q9BVL2 599 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 MXD3Q9BW11 206 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 TRIM9Q9C026 710 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 BLZF1Q9H2G9 400 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 CPVLQ9H3G5 476 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 DNAJC18Q9H819 358 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 PSTPIP2Q9H939 334 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 VAT1LQ9HCJ6 419 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 EXOC1Q9NV70 894 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 TRMT1Q9NXH9 659 aaKnown RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 HOXC10Q9NYD6 342 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 DDX25Q9UHL0 483 aaKnown RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 FBXO4Q9UKT5 387 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 PNMA2Q9UL42 364 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 CORO1CQ9ULV4 474 aaPredicted RBP3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 NFU1Q9UMS0 254 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 RABL2BQ9UNT1 228 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 TNFSF13BQ9Y275 285 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 PPP2R2CQ9Y2T4 447 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 GMEB1Q9Y692 573 aa3.46□□□□□ -1.86
LINCR-0001-203ENST00000524047 TRIP12Q14669 1992 aaPredicted RBP3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 WDR90Q96KV7 1748 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 TMEM221A6NGB7 291 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 DDTLA6NHG4 134 aaPredicted RBP3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 PP2D1A8MPX8 630 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 LGALS16A8MUM7 142 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 F5H6K3 240 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 FFAR2O15552 330 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 PPIP5K2O43314 1243 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 SLC37A4O43826 429 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 PENKP01210 267 aaPredicted RBP3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 CYP3A4P08684 503 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 IDO1P14902 403 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 HOXD10P28358 340 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 CASP1P29466 404 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 POLD2P49005 469 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 FNTAP49354 379 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 PAPOLAP51003 745 aaKnown RBP3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 P2RX3P56373 397 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 TUBB4BP68371 445 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 ASIC1P78348 528 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 LRRC63Q05C16 580 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 KLRC3Q07444 240 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 PMPCAQ10713 525 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 TCP10Q12799 353 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 DYNC1I2Q13409 638 aaKnown RBP3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 CUL3Q13618 768 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 TUBB2AQ13885 445 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 SPARCL1Q14515 664 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 E2F5Q15329 346 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 QRICH1Q2TAL8 776 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 TUBB8Q3ZCM7 444 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 HSP90AA4PQ58FG1 418 aa3.45□□□□□ -1.86
LINCR-0001-203ENST00000524047 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms