RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 LRCH3Q96II8 777 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 KCNA7Q96RP8 456 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 APOL4Q9BPW4 351 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 ACTR8Q9H981 624 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 SYTL2Q9HCH5 934 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 TRIM39Q9HCM9 518 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 CMTM6Q9NX76 183 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 DKK3Q9UBP4 350 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 ADGRE2Q9UHX3 823 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 CDH7Q9ULB5 785 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 BTN3A1O00481 513 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 SLC22A1O15245 554 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 CYBBP04839 570 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 ZNF37AP17032 561 aaPredicted RBP8.99□□□□□ -0.97
CSMD1-212ENST00000523387 CAPN3P20807 821 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 TCEA1P23193 301 aaKnown RBP8.99□□□□□ -0.97
CSMD1-212ENST00000523387 SLC13A2Q13183 592 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 COLEC12Q5KU26 742 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 ARMC4Q5T2S8 1044 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 LCN8Q6JVE9 175 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 HACD2Q6Y1H2 254 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 METTL23Q86XA0 190 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 SKA2Q8WVK7 121 aaPredicted RBP8.99□□□□□ -0.97
CSMD1-212ENST00000523387 SLC47A1Q96FL8 570 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 HBEGFQ99075 208 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 KIFC1Q9BW19 673 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 HACL1Q9UJ83 578 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 ERVK-11Q9UQG0 969 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 INVSQ9Y283 1065 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 FAM72CH0Y354 149 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 H0YAE9 185 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 ZNF286BP0CG31 522 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 RAP2AP10114 183 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 BDNFP23560 247 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 FMO3P31513 532 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 DIO3P55073 304 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 C6orf141Q5SZD1 244 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 FAM72AQ5TYM5 149 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 FAM72DQ6L9T8 149 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 IL27RAQ6UWB1 636 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 GCNT7Q6ZNI0 430 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 TFAP2DQ7Z6R9 452 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 FAM72BQ86X60 149 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 MICALL2Q8IY33 904 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 SCML4Q8N228 414 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 OR56A4Q8NGH8 313 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 STAG3L4Q8TBR4 150 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 GPR20Q99678 358 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 SH3GL1Q99961 368 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 RBM4BQ9BQ04 359 aaKnown RBP8.99□□□□□ -0.97
CSMD1-212ENST00000523387 RBM4Q9BWF3 364 aaKnown RBP8.99□□□□□ -0.97
CSMD1-212ENST00000523387 BTBD3Q9Y2F9 522 aa8.99□□□□□ -0.97
CSMD1-212ENST00000523387 TBKBP1A7MCY6 615 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 DYNC1LI2O43237 492 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-212ENST00000523387 TSPAN3O60637 253 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 TULP3O75386 442 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 WDR47O94967 919 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 CDH1P12830 882 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 HSD17B1P14061 328 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 KCNA5P22460 613 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 SLC6A2P23975 617 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 CD86P42081 329 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 INPP1P49441 399 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 NRG1Q02297 640 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-212ENST00000523387 LAPTM5Q13571 262 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 SPCS2Q15005 226 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 TECRLQ5HYJ1 363 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 CELF3Q5SZQ8 465 aaKnown RBP8.98□□□□□ -0.97
CSMD1-212ENST00000523387 PRR23BQ6ZRT6 265 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 KIAA0408Q6ZU52 694 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 PIM3Q86V86 326 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 RETREG3Q86VR2 466 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 LRRC52Q8N7C0 313 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 PNPLA1Q8N8W4 532 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 EMID1Q96A84 441 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-212ENST00000523387 OSMRQ99650 979 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 COLEC11Q9BWP8 271 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 DUSP16Q9BY84 665 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 GOLGA2P5Q9HBQ8 144 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 MOV10Q9HCE1 1003 aaKnown RBP8.98□□□□□ -0.97
CSMD1-212ENST00000523387 VTA1Q9NP79 307 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 RASSF1Q9NS23 344 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 TRMT13Q9NUP7 481 aaKnown RBP8.98□□□□□ -0.97
CSMD1-212ENST00000523387 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.98□□□□□ -0.97
CSMD1-212ENST00000523387 EIF3LQ9Y262 564 aaKnown RBP8.98□□□□□ -0.97
CSMD1-212ENST00000523387 B3GNT3Q9Y2A9 372 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 PCDHB3Q9Y5E6 796 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 CENPXA8MT69 81 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 XPNPEP2O43895 674 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 EEFSECP57772 596 aaKnown RBP8.98□□□□□ -0.97
CSMD1-212ENST00000523387 BTG3Q14201 252 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-212ENST00000523387 NOMO2Q5JPE7 1267 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 KIAA0930Q6ICG6 404 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-212ENST00000523387 FAM117BQ6P1L5 589 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 ANGPTL8Q6UXH0 198 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 CATSPERGQ6ZRH7 1159 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 HFE2Q6ZVN8 426 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 PLPPR4Q7Z2D5 763 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 SPATA19Q7Z5L4 167 aa8.98□□□□□ -0.97
CSMD1-212ENST00000523387 CLIP4Q8N3C7 705 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms