RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SH3KBP1Q96B97 665 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 RIOK2Q9BVS4 552 aaKnown RBP22.53■■□□□ 1.2
PVT1-218ENST00000523328 VPS18Q9P253 973 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 KLHL3Q9UH77 587 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 ZNHIT2Q9UHR6 403 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 KCNMB2Q9Y691 235 aa22.53■■□□□ 1.2
PVT1-218ENST00000523328 OAS3Q9Y6K5 1087 aaKnown RBP22.53■■□□□ 1.2
PVT1-218ENST00000523328 LRRC10BA6NIK2 292 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 K7EM74 188 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 ASMTLO95671 621 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 ATP1A1P05023 1023 aaKnown RBP22.52■■□□□ 1.2
PVT1-218ENST00000523328 TCF4P15884 667 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 NR1D1P20393 614 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 ARL4AP40617 200 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 STC1P52823 247 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 CDH6P55285 790 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 IHHQ14623 411 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 SMTNL2Q2TAL5 461 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 CHST15Q7LFX5 561 aaPredicted RBP22.52■■□□□ 1.2
PVT1-218ENST00000523328 NDUFAF2Q8N183 169 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 ESX1Q8N693 406 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 TEX26Q8N6G2 289 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 NSMCE1Q8WV22 266 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 CSPG4P5Q96PW8 444 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 STN1Q9H668 368 aaKnown RBP22.52■■□□□ 1.2
PVT1-218ENST00000523328 NT5MQ9NPB1 228 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 CNOT6Q9ULM6 557 aaKnown RBP22.52■■□□□ 1.2
PVT1-218ENST00000523328 KCNK6Q9Y257 313 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 KCTD3Q9Y597 815 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 RPS6KL1Q9Y6S9 549 aa22.52■■□□□ 1.2
PVT1-218ENST00000523328 MN1Q10571 1320 aaPredicted RBP22.52■■□□□ 1.2
PVT1-218ENST00000523328 BLACEA4D250 179 aa22.51■■□□□ 1.19
PVT1-218ENST00000523328 MTSS1O43312 755 aa22.51■■□□□ 1.19
PVT1-218ENST00000523328 PCK1P35558 622 aa22.51■■□□□ 1.19
PVT1-218ENST00000523328 MAPK9P45984 424 aa22.51■■□□□ 1.19
PVT1-218ENST00000523328 SLC9B2Q86UD5 537 aa22.51■■□□□ 1.19
PVT1-218ENST00000523328 WDR24Q96S15 920 aa22.51■■□□□ 1.19
PVT1-218ENST00000523328 HERPUD2Q9BSE4 406 aa22.51■■□□□ 1.19
PVT1-218ENST00000523328 TBC1D10AQ9BXI6 508 aa22.51■■□□□ 1.19
PVT1-218ENST00000523328 CNOT8Q9UFF9 292 aaKnown RBP22.51■■□□□ 1.19
PVT1-218ENST00000523328 ANKRD34CP0C6C1 535 aa22.5■■□□□ 1.19
PVT1-218ENST00000523328 F3P13726 295 aa22.5■■□□□ 1.19
PVT1-218ENST00000523328 ANKRD20A12PQ8NF67 263 aa22.5■■□□□ 1.19
PVT1-218ENST00000523328 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.5■■□□□ 1.19
PVT1-218ENST00000523328 EPB41L1Q9H4G0 881 aa22.5■■□□□ 1.19
PVT1-218ENST00000523328 NOTCH2Q04721 2471 aa22.5■■□□□ 1.19
PVT1-218ENST00000523328 CLDN7O95471 211 aa22.49■■□□□ 1.19
PVT1-218ENST00000523328 FTLP02792 175 aaPredicted RBP22.49■■□□□ 1.19
PVT1-218ENST00000523328 ACP5P13686 325 aa22.49■■□□□ 1.19
PVT1-218ENST00000523328 ZNF28P17035 718 aa22.49■■□□□ 1.19
PVT1-218ENST00000523328 BOLA3Q53S33 107 aa22.49■■□□□ 1.19
PVT1-218ENST00000523328 TCTN3Q6NUS6 607 aa22.49■■□□□ 1.19
PVT1-218ENST00000523328 LYSMD3Q7Z3D4 306 aa22.49■■□□□ 1.19
PVT1-218ENST00000523328 RAVER1Q8IY67 606 aaKnown RBP22.49■■□□□ 1.19
PVT1-218ENST00000523328 HSPH1Q92598 858 aa22.49■■□□□ 1.19
PVT1-218ENST00000523328 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.49■■□□□ 1.19
PVT1-218ENST00000523328 MYO6Q9UM54 1294 aa22.49■■□□□ 1.19
PVT1-218ENST00000523328 KIR2DS5A0A0G2JLQ3 304 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 A0A0G2JNG1 304 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 LILRA5A6NI73 299 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 FADS2P1A8MWK0 482 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 KIR2DS3K7RE56 304 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 PRLP01236 227 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 C9P02748 559 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 FURINP09958 794 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 RARAP10276 462 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 GZMAP12544 262 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 SLC2A4P14672 509 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 SERPINB6P35237 376 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 EPHB1P54762 984 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 MLLT10P55197 1068 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 GFERP55789 205 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 KIR2DS5Q14953 304 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 TXNRD3NBQ6F5E7 133 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 ALG1LQ6GMV1 187 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 PLXDC1Q8IUK5 500 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 ZNF653Q96CK0 615 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 RNF31Q96EP0 1072 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 ULBP3Q9BZM4 244 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 POLR1EQ9GZS1 481 aaKnown RBP22.48■■□□□ 1.19
PVT1-218ENST00000523328 HSD3B7Q9H2F3 369 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 RMI1Q9H9A7 625 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 OGFRQ9NZT2 677 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 CPNE7Q9UBL6 633 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 DNPEPQ9ULA0 475 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 PCDHB3Q9Y5E6 796 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 SCINQ9Y6U3 715 aa22.48■■□□□ 1.19
PVT1-218ENST00000523328 RP1L1Q8IWN7 2480 aaPredicted RBP22.48■■□□□ 1.19
PVT1-218ENST00000523328 MKRN2OSH3BPM6 223 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 SNX2O60749 519 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 DLSTP36957 453 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 NOP2P46087 812 aaKnown RBP22.47■■□□□ 1.19
PVT1-218ENST00000523328 UBE2IP63279 158 aaKnown RBP22.47■■□□□ 1.19
PVT1-218ENST00000523328 MYL5Q02045 173 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 FOXM1Q08050 763 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 ITKQ08881 620 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 C4orf17Q53FE4 359 aa22.47■■□□□ 1.19
PVT1-218ENST00000523328 HENMT1Q5T8I9 393 aaKnown RBP22.47■■□□□ 1.19
PVT1-218ENST00000523328 RBM43Q6ZSC3 357 aaKnown RBP22.47■■□□□ 1.19
PVT1-218ENST00000523328 ZNF571Q7Z3V5 609 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms