RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 VARSP26640 1264 aaKnown RBP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 GNPDA1P46926 289 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 UGT2B15P54855 530 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 NAE1Q13564 534 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 INAVAQ3KP66 663 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 IRGCQ6NXR0 463 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 SPATA6LQ8N4H0 392 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 ZNF671Q8TAW3 534 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 TCF12Q99081 682 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 TRAF6Q9Y4K3 522 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 C2P06681 752 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 RFTN1Q14699 578 aaPredicted RBP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 XKR4Q5GH76 650 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 TCEAL5Q5H9L2 206 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 DEPDC4Q8N2C3 294 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 ZNF563Q8TA94 476 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 ZNF514Q96K75 400 aaPredicted RBP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 TEFMQ96QE5 360 aaKnown RBP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 DDX18Q9NVP1 670 aaKnown RBP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 MAT2BQ9NZL9 334 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 IRAK2O43187 625 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 LINC00032P0C843 101 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 PRG2P13727 222 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 PCSK2P16519 638 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 TTKP33981 857 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 PNLIPRP1P54315 467 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 CYP4F2P78329 520 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 CYP4F8P98187 520 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 NR1D2Q14995 579 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 NET1Q7Z628 596 aaPredicted RBP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 NKD2Q969F2 451 aaPredicted RBP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 PCBD2Q9H0N5 130 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 MTRRQ9UBK8 725 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 FCF1Q9Y324 198 aaKnown RBP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 HEBP2Q9Y5Z4 205 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 A0A0U1RQF3 1178 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 NPEPPSL1A6NEC2 478 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 FAM163BP0C2L3 166 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 MASP1P48740 699 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 APLP1P51693 650 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 SPANXN2Q5MJ10 180 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 CLVS1Q8IUQ0 354 aaPredicted RBP16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 HMCESQ96FZ2 354 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 KLHL32Q96NJ5 620 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 YIPF1Q9Y548 306 aa16.18■□□□□ 0.18
PCDHA3-201ENST00000522353 LRATO95237 230 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 TRBC1P01850 177 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 HID1Q8IV36 788 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 RAD51AP1Q96B01 352 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 TBATAQ96M53 351 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 FGFBP2Q9BYJ0 223 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 KLHL25Q9H0H3 589 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 C15orf41Q9Y2V0 281 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 OR2AG2A6NM03 316 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 TRIM38O00635 465 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 RPIAP49247 311 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 MINDY4Q4G0A6 757 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 CMC1Q7Z7K0 106 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 UNC5BQ8IZJ1 945 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 TRMT61BQ9BVS5 477 aaKnown RBP16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 C6orf62Q9GZU0 229 aaPredicted RBP16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 UNC93B1Q9H1C4 597 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 ABCG8Q9H221 673 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 SESN1Q9Y6P5 492 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 A0A1W2PRU2 124 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 SLC22A3O75751 556 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 UNC5CO95185 931 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 TFPIP10646 304 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 GRIA3P42263 894 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 OR4A15Q8NGL6 344 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 LMLNQ96KR4 655 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 PRICKLE1Q96MT3 831 aaPredicted RBP16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 ABCB8Q9NUT2 735 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 CLN6Q9NWW5 311 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 NUDT4Q9NZJ9 180 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 FBXW11Q9UKB1 542 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 ATP6AP2A0A1C7CYW4 349 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 H7C0S8 307 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 ATP6AP2O75787 350 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 TM7SF2O76062 418 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 TRAF3Q13114 568 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 MARK4Q96L34 752 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 GPR21Q99679 349 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 BRINP2Q9C0B6 783 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 CDH19Q9H159 772 aa16.17■□□□□ 0.18
PCDHA3-201ENST00000522353 RCCD1A6NED2 376 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 OR10H3O60404 316 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 DLG2Q15700 870 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 CUZD1Q86UP6 607 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 HDDC3Q8N4P3 179 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 SUSD3Q96L08 255 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 SEMA6AQ9H2E6 1030 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 TCAF1Q9Y4C2 921 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 DHX15O43143 795 aaKnown RBP16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 SYN1P17600 705 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 DGKEP52429 567 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 ATP12AP54707 1039 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 RALGDSQ12967 914 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 PTP4A2Q12974 167 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 LDLRAP1Q5SW96 308 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms