RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MAPK10P53779 464 aa20.54■□□□□ 0.88
SDCBP-209ENST00000522243 HENMT1Q5T8I9 393 aaKnown RBP20.54■□□□□ 0.88
SDCBP-209ENST00000522243 NKAIN2Q5VXU1 208 aa20.54■□□□□ 0.88
SDCBP-209ENST00000522243 ALS2CLQ60I27 953 aa20.54■□□□□ 0.88
SDCBP-209ENST00000522243 CHST15Q7LFX5 561 aaPredicted RBP20.54■□□□□ 0.88
SDCBP-209ENST00000522243 ZNF761Q86XN6 746 aaPredicted RBP20.54■□□□□ 0.88
SDCBP-209ENST00000522243 RAVER1Q8IY67 606 aaKnown RBP20.54■□□□□ 0.88
SDCBP-209ENST00000522243 TC2NQ8N9U0 490 aa20.54■□□□□ 0.88
SDCBP-209ENST00000522243 SPATA22Q8NHS9 363 aa20.54■□□□□ 0.88
SDCBP-209ENST00000522243 EID2BQ96D98 161 aa20.54■□□□□ 0.88
SDCBP-209ENST00000522243 SLC25A51Q9H1U9 297 aa20.54■□□□□ 0.88
SDCBP-209ENST00000522243 ZFYVE1Q9HBF4 777 aa20.54■□□□□ 0.88
SDCBP-209ENST00000522243 ARFGAP3Q9NP61 516 aa20.54■□□□□ 0.88
SDCBP-209ENST00000522243 ALG6Q9Y672 507 aa20.54■□□□□ 0.88
SDCBP-209ENST00000522243 EML2O95834 649 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 MT-CYBP00156 380 aaPredicted RBP20.53■□□□□ 0.88
SDCBP-209ENST00000522243 PECAM1P16284 738 aaPredicted RBP20.53■□□□□ 0.88
SDCBP-209ENST00000522243 CD1CP29017 333 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 CDKN2BP42772 138 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 VAC14Q08AM6 782 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 PEX6Q13608 980 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 NR1D2Q14995 579 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 C16orf72Q14CZ0 275 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 ZNF648Q5T619 568 aaPredicted RBP20.53■□□□□ 0.88
SDCBP-209ENST00000522243 ZNF574Q6ZN55 896 aaPredicted RBP20.53■□□□□ 0.88
SDCBP-209ENST00000522243 CMKLR1Q99788 373 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 GLOD4Q9HC38 313 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 UBP1Q9NZI7 540 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 KCNK6Q9Y257 313 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 PCDHGA7Q9Y5G6 932 aa20.53■□□□□ 0.88
SDCBP-209ENST00000522243 CST8O60676 142 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 PTPN3P26045 913 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 CDK18Q07002 472 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 TGIF1Q15583 401 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 TEX44Q53QW1 395 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 SARM1Q6SZW1 724 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 PCSK4Q6UW60 755 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 SPOCD1Q6ZMY3 1216 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 RCBTB1Q8NDN9 531 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 GPR26Q8NDV2 337 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 SLC37A2Q8TED4 501 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 USP7Q93009 1102 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 SPATA16Q9BXB7 569 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 VPS18Q9P253 973 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 SSUH2Q9Y2M2 353 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 ZNF711Q9Y462 761 aa20.52■□□□□ 0.88
SDCBP-209ENST00000522243 PRAMEF33A0A0G2JMD5 474 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 RGSL1A5PLK6 1076 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 ZW10O43264 779 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 PSTPIP1O43586 416 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 PRAMEF10O60809 474 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 PMPCBO75439 489 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 ACP5P13686 325 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 MPSTP25325 297 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 GPR3P46089 330 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 MARCKSL1P49006 195 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 PPM1FP49593 454 aaPredicted RBP20.51■□□□□ 0.87
SDCBP-209ENST00000522243 ADCY2Q08462 1091 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 LRP8Q14114 963 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 TFDP2Q14188 446 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 PRKD1Q15139 912 aaPredicted RBP20.51■□□□□ 0.87
SDCBP-209ENST00000522243 CCDC81Q6ZN84 652 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 TMEM159Q96B96 161 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 TADA1Q96BN2 335 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 HAUS1Q96CS2 278 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 GPR63Q9BZJ6 419 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 KCNK4Q9NYG8 393 aa20.51■□□□□ 0.87
SDCBP-209ENST00000522243 IGHV1OR21-1A0A087WYE8 117 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 A0A0A6YYK5 440 aaPredicted RBP20.5■□□□□ 0.87
SDCBP-209ENST00000522243 IGHV5-10-1A0A0J9YXX1 117 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 F5H423 210 aaPredicted RBP20.5■□□□□ 0.87
SDCBP-209ENST00000522243 SNX2O60749 519 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 CCL4P13236 92 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 NR2C2P49116 596 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 HADHBP55084 474 aaKnown RBP20.5■□□□□ 0.87
SDCBP-209ENST00000522243 CFHR1Q03591 330 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 SRSF6Q13247 344 aaKnown RBP20.5■□□□□ 0.87
SDCBP-209ENST00000522243 TAZQ16635 292 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 TAF1BQ53T94 588 aaPredicted RBP20.5■□□□□ 0.87
SDCBP-209ENST00000522243 TMC3Q7Z5M5 1100 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 ZC3H18Q86VM9 953 aaKnown RBP20.5■□□□□ 0.87
SDCBP-209ENST00000522243 ZFAND4Q86XD8 727 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 TFB1MQ8WVM0 346 aaKnown RBP20.5■□□□□ 0.87
SDCBP-209ENST00000522243 CCDC74BQ96LY2 380 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 TEKT5Q96M29 485 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 MAGEE1Q9HCI5 957 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 FOXJ2Q9P0K8 574 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 TMEM9Q9P0T7 183 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 ATXN10Q9UBB4 475 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 TBC1D29Q9UFV1 150 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 PCDHA13Q9Y5I0 950 aa20.5■□□□□ 0.87
SDCBP-209ENST00000522243 K7ENP7 123 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 AURKAO14965 403 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 NVLO15381 856 aaKnown RBP20.49■□□□□ 0.87
SDCBP-209ENST00000522243 GRID2O43424 1007 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 C1QL1O75973 258 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 SLC25A14O95258 325 aaPredicted RBP20.49■□□□□ 0.87
SDCBP-209ENST00000522243 NDST3O95803 873 aa20.49■□□□□ 0.87
SDCBP-209ENST00000522243 ZNF8P17098 575 aaPredicted RBP20.49■□□□□ 0.87
SDCBP-209ENST00000522243 CSF2RBP32927 897 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms