RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	CTAGE9	A4FU28	777 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	FAM90A26	D6RGX4	464 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115		F5H0A9	414 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115		M0QZ24	198 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	SCAMP1	O15126	338 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	LINC01565	O15544	149 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	KCNN4	O15554	427 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	DDX58	O95786	925 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	PLG	P00747	810 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	SP1	P08047	785 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	CTAGE8	P0CG41	777 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	CETP	P11597	493 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	PBX3	P40426	434 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	MMP14	P50281	582 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	MRPS34	P82930	218 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	FRG1	Q14331	258 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	GPATCH4	Q5T3I0	446 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	GFI1B	Q5VTD9	330 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	C18orf63	Q68DL7	685 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	PAPD4	Q6PIY7	484 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	CYP20A1	Q6UW02	462 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	GSG1L	Q6UXU4	331 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	SEPT14	Q6ZU15	432 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	CTAGE4	Q8IX94	777 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	CCDC13	Q8IYE1	715 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	HACE1	Q8IYU2	909 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	METTL27	Q8N6F8	245 aa	Predicted RBP	4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	KBTBD3	Q8NAB2	608 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	IL17RC	Q8NAC3	791 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	SIL1	Q9H173	461 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	SLC28A3	Q9HAS3	691 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	LRRC4	Q9HBW1	653 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZFP57	Q9NU63	452 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	CNOT8	Q9UFF9	292 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	RALY	Q9UKM9	306 aa	Known RBP	4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	KCNE2	Q9Y6J6	123 aa		4.11	□□□□□ -1.75
PTPN12-215	ENST00000522115	C16orf97	H3BN30	126 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	P2RY10	O00398	339 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	XPNPEP2	O43895	674 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	LMX1B	O60663	402 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	WDR1	O75083	606 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	NDUFS3	O75489	264 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	SLC25A12	O75746	678 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	CRYAA	P02489	173 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	SPARC	P09486	303 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	MARK3	P27448	753 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	RPS3A	P61247	264 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	TFAP4	Q01664	338 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	GOLGA8DP	Q0D2H9	430 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	GTF2H2	Q13888	395 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	RBBP5	Q15291	538 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	CCNYL2	Q5T2Q4	361 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	IRAK1BP1	Q5VVH5	260 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	TTI2	Q6NXR4	508 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	GTF2H2C	Q6P1K8	395 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	NCEH1	Q6PIU2	408 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	TSPAN33	Q86UF1	283 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	TDRD7	Q8NHU6	1098 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	DNAAF4	Q8WXU2	420 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	MUC13	Q9H3R2	512 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	SDF2L1	Q9HCN8	221 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	RANGRF	Q9HD47	186 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	EHD2	Q9NZN4	543 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	CWC15	Q9P013	229 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	OR14J1	Q9UGF5	321 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	FBXW11	Q9UKB1	542 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	FBXL2	Q9UKC9	423 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	OR2W1	Q9Y3N9	320 aa		4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZCWPW2	A0A1B0GU75	182 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115		A0A1W2PP11	408 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	KANSL1L	A0AUZ9	987 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	LIPT2	A6NK58	231 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	HS3ST1	O14792	307 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	ANKRD28	O15084	1053 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	MLYCD	O95822	493 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	TBX18	O95935	607 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	EIF2S1	P05198	315 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	FAM106CP	P0CH98	169 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	LAMP2	P13473	410 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	IL7R	P16871	459 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	ZNF23	P17027	643 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	KCNA5	P22460	613 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	CHM	P24386	653 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	HOXA1	P49639	335 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	CLDN20	P56880	219 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	TAS2R40	P59535	323 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	KRTAP10-6	P60371	365 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	KRTAP10-7	P60409	375 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	CEBPZ	Q03701	1054 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	PNLIPRP3	Q17RR3	467 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	STPG1	Q5TH74	334 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	C19orf48	Q6RUI8	117 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	SLC9B2	Q86UD5	537 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	GPR180	Q86V85	440 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	ADSSL1	Q8N142	457 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	FRMD1	Q8N878	549 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	ACVR1C	Q8NER5	493 aa		4.09	□□□□□ -1.75
PTPN12-215	ENST00000522115	ARHGEF2	Q92974	986 aa	Known RBP	4.09	□□□□□ -1.75

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