RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 OR2M4Q96R27 311 aa17.74■□□□□ 0.43
TRAPPC9-211ENST00000521700 GORASP1Q9BQQ3 440 aa17.74■□□□□ 0.43
TRAPPC9-211ENST00000521700 SPATA16Q9BXB7 569 aa17.74■□□□□ 0.43
TRAPPC9-211ENST00000521700 VPS18Q9P253 973 aa17.74■□□□□ 0.43
TRAPPC9-211ENST00000521700 LRIT1Q9P2V4 623 aa17.74■□□□□ 0.43
TRAPPC9-211ENST00000521700 NFKBIL1Q9UBC1 381 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC9-211ENST00000521700 APPL1Q9UKG1 709 aa17.74■□□□□ 0.43
TRAPPC9-211ENST00000521700 ENTPD2Q9Y5L3 495 aa17.74■□□□□ 0.43
TRAPPC9-211ENST00000521700 RNF215Q9Y6U7 377 aa17.74■□□□□ 0.43
TRAPPC9-211ENST00000521700 URB1O60287 2271 aaKnown RBP17.74■□□□□ 0.43
TRAPPC9-211ENST00000521700 ANKRD11Q6UB99 2663 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 A0A1W2PQM1 296 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 KCNN4O15554 427 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 BRINP1O60477 761 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 PNLIPP16233 465 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 BPIP17213 487 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 DCDC1P59894 354 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 SPIDRQ14159 915 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 ANKRD20A2Q5SQ80 823 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 ANKRD20A1Q5TYW2 823 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 ANKRD20A3Q5VUR7 823 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 GALNT13Q8IUC8 556 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 Q8N9G6 341 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 ATXN7L3BQ96GX2 97 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 HES6Q96HZ4 224 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 CDH19Q9H159 772 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 GBA3Q9H227 469 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 LRRN3Q9H3W5 708 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 SYNDIG1Q9H7V2 258 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 BPIFA1Q9NP55 256 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 RAD18Q9NS91 495 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 ZNHIT2Q9UHR6 403 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 PRKAB1Q9Y478 270 aa17.73■□□□□ 0.43
TRAPPC9-211ENST00000521700 ZZEF1O43149 2961 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 PKD1L2Q7Z442 2459 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 NUDT21O43809 227 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 ECEL1O95672 775 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 AGTP01019 485 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 MPOP05164 745 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 RPLP0P05388 317 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 ACTR1BP42025 376 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 PDX1P52945 283 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 MAZP56270 477 aaKnown RBP17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 ACTR1AP61163 376 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 SLC1A5Q15758 541 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 ZNF648Q5T619 568 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 ITPRIPL1Q6GPH6 555 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 NAGSQ8N159 534 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 ARL14Q8N4G2 192 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 TTC30BQ8N4P2 665 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 TRAM1L1Q8N609 369 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 PATE1Q8WXA2 126 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 GRAMD1AQ96CP6 724 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 FERMT1Q9BQL6 677 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 ZSCAN5AQ9BUG6 496 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 TRABDQ9H4I3 376 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 ARFGAP3Q9NP61 516 aa17.72■□□□□ 0.43
TRAPPC9-211ENST00000521700 UNC13CQ8NB66 2214 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 A0A1W2PNU3 283 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 ARHGAP6O43182 974 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 TLX3O43711 291 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 ANXA9O76027 345 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 SLC25A14O95258 325 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 HLA-DPA1P20036 260 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 HMGCLP35914 325 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 TNNT3P45378 269 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 LSSP48449 732 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 GEMP55040 296 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 KLF1Q13351 362 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 PEX6Q13608 980 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 LRP8Q14114 963 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 ZNF569Q5MCW4 686 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 CHST15Q7LFX5 561 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 CCNJLQ8IV13 435 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 CCDC110Q8TBZ0 833 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 GLYATL1Q969I3 302 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 GFM1Q96RP9 751 aaKnown RBP17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 RMI1Q9H9A7 625 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 POLR1BQ9H9Y6 1135 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 TRIM39Q9HCM9 518 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 HACD3Q9P035 362 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 ATXN10Q9UBB4 475 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 GUCA1BQ9UMX6 200 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 SCN8AQ9UQD0 1980 aa17.71■□□□□ 0.43
TRAPPC9-211ENST00000521700 ZFC3H1O60293 1989 aaKnown RBP17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 TCRBV7S2A1N4TA0A589 114 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 GOLGA6L9A6NEM1 432 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 B4GAT1O43505 415 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 NUAK1O60285 661 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 PTMAP06454 111 aaKnown RBP17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 ZNF8P17098 575 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 PSMB4P28070 264 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 GABREP78334 506 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 B4GALNT1Q00973 533 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 KIF26BQ2KJY2 2108 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 PDPK2PQ6A1A2 396 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 RANBP10Q6VN20 620 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 SPRED1Q7Z699 444 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 B3GNT8Q7Z7M8 397 aa17.7■□□□□ 0.42
TRAPPC9-211ENST00000521700 ADGRG6Q86SQ4 1221 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms