RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 PLA2G15Q8NCC3 412 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 PYROXD1Q8WU10 500 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 CAVIN3Q969G5 261 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 KLHDC7BQ96G42 594 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 BMFQ96LC9 184 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 TBATAQ96M53 351 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 NAT9Q9BTE0 207 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 TSPYL1Q9H0U9 437 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 SUDS3Q9H7L9 328 aaPredicted RBP15.24■□□□□ 0.03
LSM1-203ENST00000520755 LRRC4CQ9HCJ2 640 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 PARD6AQ9NPB6 346 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 HS3ST3A1Q9Y663 406 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 GPR179Q6PRD1 2367 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 CCDC151A5D8V7 595 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 H7C0S8 307 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 VILLO15195 856 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 LRP3O75074 770 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 SOD1P00441 154 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 THEGLP0DJG4 465 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 ARCN1P48444 511 aaKnown RBP15.23■□□□□ 0.03
LSM1-203ENST00000520755 DCDC1P59894 354 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 IRX4P78413 519 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 PDE1BQ01064 536 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 INPP5AQ14642 412 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 SLMAPQ14BN4 828 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 CSRP2Q16527 193 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 KYNUQ16719 465 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 SPANXN3Q5MJ09 141 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 HENMT1Q5T8I9 393 aaKnown RBP15.23■□□□□ 0.03
LSM1-203ENST00000520755 ALS2CLQ60I27 953 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 KYAT3Q6YP21 454 aaKnown RBP15.23■□□□□ 0.03
LSM1-203ENST00000520755 Q6ZSR6 202 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 CEP128Q6ZU80 1094 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 ABI3BPQ7Z7G0 1075 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 NRSN1Q8IZ57 195 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 OR13H1Q8NG92 308 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 SCAMP4Q969E2 229 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 SKA1Q96BD8 255 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 AP2M1Q96CW1 435 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 FAM122AQ96E09 287 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 CDKN2AIPNLQ96HQ2 116 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 C19orf43Q9BQ61 176 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 ABCG8Q9H221 673 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 CAPN10Q9HC96 672 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 KCTD5Q9NXV2 234 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 ANKRD6Q9Y2G4 727 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 FNDC3AQ9Y2H6 1198 aaKnown RBP15.23■□□□□ 0.03
LSM1-203ENST00000520755 PKP3Q9Y446 797 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 FAM169AQ9Y6X4 670 aa15.23■□□□□ 0.03
LSM1-203ENST00000520755 OTOGLQ3ZCN5 2332 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 ZFC3H1O60293 1989 aaKnown RBP15.22■□□□□ 0.03
LSM1-203ENST00000520755 MAGEB16A2A368 324 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 CCDC162PA2VCL2 907 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 K7ESM1 405 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 TLR4O00206 839 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 TTC4O95801 387 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 POLBP06746 335 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 PRSS56P0CW18 603 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 H2AFXP16104 143 aaPredicted RBP15.22■□□□□ 0.03
LSM1-203ENST00000520755 FOXN2P32314 431 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 SPAM1P38567 509 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 PMS2P54278 862 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 GRIK2Q13002 908 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 LAMB3Q13751 1172 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 BRD3Q15059 726 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 RAET1GQ6H3X3 334 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 FAM151BQ6UXP7 276 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 IQCHQ86VS3 1027 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 CCNJLQ8IV13 435 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 RAVER1Q8IY67 606 aaKnown RBP15.22■□□□□ 0.03
LSM1-203ENST00000520755 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.22■□□□□ 0.03
LSM1-203ENST00000520755 GSDMBQ8TAX9 411 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 HDAC10Q969S8 669 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 PLEKHG4BQ96PX9 1271 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 AGAP2Q99490 1192 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 RIOK2Q9BVS4 552 aaKnown RBP15.22■□□□□ 0.03
LSM1-203ENST00000520755 GTPBP2Q9BX10 602 aaKnown RBP15.22■□□□□ 0.03
LSM1-203ENST00000520755 FAM83DQ9H4H8 585 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 IL26Q9NPH9 171 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 SMYD2Q9NRG4 433 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 SLC17A6Q9P2U8 582 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 OR1A2Q9Y585 309 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 LAMA1P25391 3075 aa15.22■□□□□ 0.03
LSM1-203ENST00000520755 CACNA1EQ15878 2313 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 TCRBV9S1A1TA0A576 114 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 LNP1A1A4G5 178 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 RGSL1A5PLK6 1076 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 FADS2P1A8MWK0 482 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 GOLGA8KD6RF30 607 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 GOLGA8TH3BQL2 631 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 RIPK2O43353 540 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 MAGEC1O60732 1142 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 ACSL3O95573 720 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 GOT2P00505 430 aaKnown RBP15.21■□□□□ 0.03
LSM1-203ENST00000520755 SYPP08247 313 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 F7P08709 466 aaPredicted RBP15.21■□□□□ 0.03
LSM1-203ENST00000520755 TSHRP16473 764 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 ENGP17813 658 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 TGM1P22735 817 aa15.21■□□□□ 0.03
LSM1-203ENST00000520755 MC4RP32245 332 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms