RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 TIGD2Q4W5G0 525 aa10.11□□□□□ -0.79
MCF2-209ENST00000520602 TECRLQ5HYJ1 363 aa10.11□□□□□ -0.79
MCF2-209ENST00000520602 CACUL1Q86Y37 369 aa10.11□□□□□ -0.79
MCF2-209ENST00000520602 PGAM4Q8N0Y7 254 aa10.11□□□□□ -0.79
MCF2-209ENST00000520602 PQLC1Q8N2U9 271 aa10.11□□□□□ -0.79
MCF2-209ENST00000520602 CDK15Q96Q40 435 aa10.11□□□□□ -0.79
MCF2-209ENST00000520602 ERVK-6Q9BXR3 956 aa10.11□□□□□ -0.79
MCF2-209ENST00000520602 GALPQ9UBC7 116 aa10.11□□□□□ -0.79
MCF2-209ENST00000520602 EIF3LQ9Y262 564 aaKnown RBP10.11□□□□□ -0.79
MCF2-209ENST00000520602 A0A088AWK7 358 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 CAPN14A8MX76 684 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 K7ERQ8 282 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 MLYCDO95822 493 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 C1QAP02745 245 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 ADH1AP07327 375 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 CCL5P13501 91 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 ATF6P18850 670 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 DGKAP23743 735 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 HOXC8P31273 242 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 ARCN1P48444 511 aaKnown RBP10.1□□□□□ -0.79
MCF2-209ENST00000520602 LCP2Q13094 533 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 CRY1Q16526 586 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 FAM26DQ5JW98 314 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 CES4AQ5XG92 561 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 SERPINA9Q86WD7 417 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 NSUN5Q96P11 429 aaKnown RBP10.1□□□□□ -0.79
MCF2-209ENST00000520602 AARSD1Q9BTE6 412 aaKnown RBP10.1□□□□□ -0.79
MCF2-209ENST00000520602 NOL6Q9H6R4 1146 aaKnown RBP10.1□□□□□ -0.79
MCF2-209ENST00000520602 STK39Q9UEW8 545 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 PARP14Q460N5 1801 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 MUSKO15146 869 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 OR4F21O95013 312 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 EPOP01588 193 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 JUNP05412 331 aaKnown RBP10.1□□□□□ -0.79
MCF2-209ENST00000520602 C8AP07357 584 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 HALP42357 657 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 CDKN1CP49918 316 aaPredicted RBP10.1□□□□□ -0.79
MCF2-209ENST00000520602 SULT2A1Q06520 285 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 CPSF6Q16630 551 aaKnown RBP eCLIP10.1□□□□□ -0.79
MCF2-209ENST00000520602 TMTC4Q5T4D3 741 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 ZFP1Q6P2D0 407 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 CCDC149Q6ZUS6 474 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 VPS50Q96JG6 964 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 SPATA17Q96L03 361 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 ELOVL6Q9H5J4 265 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 NOL11Q9H8H0 719 aaKnown RBP10.1□□□□□ -0.79
MCF2-209ENST00000520602 TREX1Q9NSU2 369 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 KIAA1522Q9P206 1035 aaPredicted RBP10.1□□□□□ -0.79
MCF2-209ENST00000520602 MTF2Q9Y483 593 aaPredicted RBP10.1□□□□□ -0.79
MCF2-209ENST00000520602 SPO11Q9Y5K1 396 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 KPNA3O00505 521 aaPredicted RBP10.1□□□□□ -0.79
MCF2-209ENST00000520602 ECI2O75521 394 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 PRDX6P30041 224 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 RGRP47804 291 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 HSPA7P48741 367 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 PTPRRQ15256 657 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 CYP51A1Q16850 503 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 TPGS2Q68CL5 300 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 NADSYN1Q6IA69 706 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 CD300LGQ6UXG3 332 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 USP45Q70EL2 814 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 CMTM8Q8IZV2 173 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 OR13J1Q8NGT2 312 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 ARRDC2Q8TBH0 407 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 EEF1AKMT1Q8WVE0 214 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 LPGAT1Q92604 370 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 TCF12Q99081 682 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 KCTD14Q9BQ13 255 aaPredicted RBP10.1□□□□□ -0.79
MCF2-209ENST00000520602 C1orf21Q9H246 121 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 AKTIPQ9H8T0 292 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 DYRK4Q9NR20 520 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 MARCH5Q9NX47 278 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 PDP2Q9P2J9 529 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 POLG2Q9UHN1 485 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 CD84Q9UIB8 345 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 GNPTGQ9UJJ9 305 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 PTGDR2Q9Y5Y4 395 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 SLC4A7Q9Y6M7 1214 aa10.1□□□□□ -0.79
MCF2-209ENST00000520602 SHROOM3Q8TF72 1996 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 SDHDO14521 159 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 INPPL1O15357 1258 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 SNUPNO95149 360 aaKnown RBP10.09□□□□□ -0.79
MCF2-209ENST00000520602 SEC24AO95486 1093 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 CNPP09543 421 aaKnown RBP10.09□□□□□ -0.79
MCF2-209ENST00000520602 ADRA1AP35348 466 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 CACHD1Q5VU97 1274 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 ADAMTSL2Q86TH1 951 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 RBM23Q86U06 439 aaKnown RBP10.09□□□□□ -0.79
MCF2-209ENST00000520602 RBFAQ8N0V3 343 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 PGBD5Q8N414 524 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 MIEF2Q96C03 454 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 EMILIN2Q9BXX0 1053 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 ABCB8Q9NUT2 735 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 MTRRQ9UBK8 725 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 PSMD13Q9UNM6 376 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 GLYATL1P3A0A0U1RQE8 302 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 GRID2O43424 1007 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 LDB2O43679 373 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 GNRH1P01148 92 aa10.09□□□□□ -0.79
MCF2-209ENST00000520602 IGLV3-25P01717 112 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms