RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 SLC2A4RGQ9NR83 387 aa8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 CHRAC1Q9NRG0 131 aa8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 TUBA8Q9NY65 449 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 OR12D3Q9UGF7 316 aa8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 ZDHHC2Q9UIJ5 367 aa8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 CROTQ9UKG9 612 aa8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 DSEQ9UL01 958 aa8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 NDRG2Q9UN36 371 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 MAGED2Q9UNF1 606 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 MYRFQ9Y2G1 1151 aa8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 MRPS23Q9Y3D9 190 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 AP4S1Q9Y587 144 aa8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 SCN1AP35498 2009 aa8.62□□□□□ -1.03
CTNNA1-223ENST00000520520 TYW5A2RUC4 315 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 TARM1B6A8C7 271 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 DFFAO00273 331 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 PTGESO14684 152 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 ACOT8O14734 319 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 MATN3O15232 486 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 DLX3O60479 287 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 NOL3O60936 208 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 IPO13O94829 963 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 LRIG2O94898 1065 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 PAPSS2O95340 614 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 PGM3O95394 542 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 CCDC166P0CW27 439 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 CD46P15529 392 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 RPL9P32969 192 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 TTKP33981 857 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 AVPR1AP37288 418 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 GRIA2P42262 883 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 SLC1A2P43004 574 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 PKNOX1P55347 436 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 STARD6P59095 220 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 NFKB2Q00653 900 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 DCTN2Q13561 401 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 PEX6Q13608 980 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 SEPT6Q14141 434 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 ACAP2Q15057 778 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 DLG2Q15700 870 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 SMAD1Q15797 465 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 NADK2Q4G0N4 442 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 KCTD21Q4G0X4 260 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 TECRLQ5HYJ1 363 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 COQ5Q5HYK3 327 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 SYPL2Q5VXT5 272 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 PM20D1Q6GTS8 502 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 RWDD4Q6NW29 188 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 KLHDC10Q6PID8 442 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 CHERPQ8IWX8 916 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 NPAS3Q8IXF0 933 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 NPWQ8N729 165 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 KDM1BQ8NB78 822 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 SUMF1Q8NBK3 374 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 TSPAN14Q8NG11 270 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 USP13Q92995 863 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 NMD3Q96D46 503 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 BIRC8Q96P09 236 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 PRPF18Q99633 342 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 IL12RB2Q99665 862 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 PKP2Q99959 881 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 HOPXQ9BPY8 73 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 APOL2Q9BQE5 337 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 LPIN3Q9BQK8 851 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 SLC2A11Q9BYW1 496 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 PLA2G2FQ9BZM2 168 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 GRIP2Q9C0E4 1043 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 POPDC3Q9HBV1 291 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 LTB4R2Q9NPC1 389 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 HEBP1Q9NRV9 189 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 VPS45Q9NRW7 570 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 GID8Q9NWU2 228 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 CACNA2D2Q9NY47 1150 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 DNMT3BQ9UBC3 853 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 RSL24D1Q9UHA3 163 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 PTBP2Q9UKA9 531 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 APPL1Q9UKG1 709 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 FBXO5Q9UKT4 447 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 G3BP2Q9UN86 482 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 SLC8A2Q9UPR5 921 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 NDUFAF1Q9Y375 327 aa8.61□□□□□ -1.03
CTNNA1-223ENST00000520520 PATJQ8NI35 1801 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 A0A087WXM4 84 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 TCAF2A6NFQ2 919 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 AQP12BA6NM10 295 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 YJEFN3A6XGL0 299 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 ZNF701M0R085 212 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 CLDN5O00501 218 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 PRRG1O14668 218 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 HNRNPRO43390 633 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 HCRTO43612 131 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 B3GAT3O94766 335 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 SORBS2O94875 1100 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 H6PDO95479 791 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 LRG1P02750 347 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 AHSGP02765 367 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 HNRNPA1P09651 372 aaKnown RBP eCLIP8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 SLC2A3P11169 496 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 ETS2P15036 469 aa8.6□□□□□ -1.03
CTNNA1-223ENST00000520520 CEBPBP17676 345 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms