RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 PMPCBO75439 489 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 MMP2P08253 660 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 ETV5P41161 510 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 MAGEA1P43355 309 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 NFATC2Q13469 925 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 LRP8Q14114 963 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 C16orf72Q14CZ0 275 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 TGIF1Q15583 401 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 MANEAQ5SRI9 462 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 CCDC181Q5TID7 509 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 CRTC3Q6UUV7 619 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 MFSD7Q6UXD7 560 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 ZFAND4Q86XD8 727 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 FAM129CQ86XR2 697 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 PHYKPLQ8IUZ5 450 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 SLITRK4Q8IW52 837 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 CCDC112Q8NEF3 446 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 SLC37A2Q8TED4 501 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 JPH3Q8WXH2 748 aaPredicted RBP16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 BRD8Q9H0E9 1235 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 ZNF711Q9Y462 761 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 PCDHGA7Q9Y5G6 932 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 ST14Q9Y5Y6 855 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 OAS3Q9Y6K5 1087 aaKnown RBP16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 ZFYVE26Q68DK2 2539 aa16.01■□□□□ 0.15
IGHV3-42-201ENST00000520410 RP1P56715 2156 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 A0A0A6YYK5 440 aaPredicted RBP16■□□□□ 0.15
IGHV3-42-201ENST00000520410 MACROD2A1Z1Q3 448 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 A8MU76 341 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 FADS2P1A8MWK0 482 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 PPM1DO15297 605 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 DUX1O43812 170 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 MTA2O94776 668 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 SLC25A14O95258 325 aaPredicted RBP16■□□□□ 0.15
IGHV3-42-201ENST00000520410 LIPCP11150 499 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 CSTF2P33240 577 aaKnown RBP eCLIP16■□□□□ 0.15
IGHV3-42-201ENST00000520410 NAP1L1P55209 391 aaKnown RBP16■□□□□ 0.15
IGHV3-42-201ENST00000520410 HHEXQ03014 270 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 CFHR1Q03591 330 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 CDK18Q07002 472 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 ZFP36L1Q07352 338 aaKnown RBP16■□□□□ 0.15
IGHV3-42-201ENST00000520410 TFDP2Q14188 446 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 LY6DQ14210 128 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 SPA17Q15506 151 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 INSCQ1MX18 579 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 ZNF648Q5T619 568 aaPredicted RBP16■□□□□ 0.15
IGHV3-42-201ENST00000520410 BZW1Q7L1Q6 419 aaKnown RBP16■□□□□ 0.15
IGHV3-42-201ENST00000520410 VASH2Q86V25 355 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 CNTD1Q8N815 330 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 OR10G6Q8NH81 332 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 SPATA22Q8NHS9 363 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 GDAP1Q8TB36 358 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 TFB1MQ8WVM0 346 aaKnown RBP16■□□□□ 0.15
IGHV3-42-201ENST00000520410 COX14Q96I36 57 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 ARHGAP9Q9BRR9 750 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 OR2AG1Q9H205 316 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 GOLPH3Q9H4A6 298 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 FOXJ2Q9P0K8 574 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 VPS18Q9P253 973 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 KLHL8Q9P2G9 620 aaPredicted RBP16■□□□□ 0.15
IGHV3-42-201ENST00000520410 SAE1Q9UBE0 346 aaPredicted RBP16■□□□□ 0.15
IGHV3-42-201ENST00000520410 KLHL3Q9UH77 587 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 ASXL3Q9C0F0 2248 aa16■□□□□ 0.15
IGHV3-42-201ENST00000520410 IGHV5-10-1A0A0J9YXX1 117 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 C3orf70A6NLC5 250 aaPredicted RBP15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 ZNF487B1APH4 448 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 TK2O00142 265 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 CST8O60676 142 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 MT-CYBP00156 380 aaPredicted RBP15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 SLC2A4P14672 509 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 CD1CP29017 333 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 GPR3P46089 330 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 HENMT1Q5T8I9 393 aaKnown RBP15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 LRRC38Q5VT99 294 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 ZNF438Q7Z4V0 828 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 ZC3H18Q86VM9 953 aaKnown RBP15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 NLRP8Q86W28 1048 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 TRIM48Q8IWZ4 208 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 ZSCAN1Q8NBB4 408 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 P3H4Q92791 437 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 IMP4Q96G21 291 aaKnown RBP15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 LYSMD1Q96S90 227 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 SLC25A51Q9H1U9 297 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 GLOD4Q9HC38 313 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 LUC7LQ9NQ29 371 aaKnown RBP15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 RAD18Q9NS91 495 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 DNAJC16Q9Y2G8 782 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 ITPR1Q14643 2758 aa15.99■□□□□ 0.15
IGHV3-42-201ENST00000520410 IGHV1OR21-1A0A087WYE8 117 aa15.98■□□□□ 0.15
IGHV3-42-201ENST00000520410 PDZK1P1A8MUH7 402 aa15.98■□□□□ 0.15
IGHV3-42-201ENST00000520410 K7ENP7 123 aa15.98■□□□□ 0.15
IGHV3-42-201ENST00000520410 NVLO15381 856 aaKnown RBP15.98■□□□□ 0.15
IGHV3-42-201ENST00000520410 GRID2O43424 1007 aa15.98■□□□□ 0.15
IGHV3-42-201ENST00000520410 PSTPIP1O43586 416 aa15.98■□□□□ 0.15
IGHV3-42-201ENST00000520410 DNAJC6O75061 913 aa15.98■□□□□ 0.15
IGHV3-42-201ENST00000520410 CCL4P13236 92 aa15.98■□□□□ 0.15
IGHV3-42-201ENST00000520410 SRSF6Q13247 344 aaKnown RBP15.98■□□□□ 0.15
IGHV3-42-201ENST00000520410 GTF2H3Q13889 308 aa15.98■□□□□ 0.15
IGHV3-42-201ENST00000520410 SEPT7Q16181 437 aaKnown RBP15.98■□□□□ 0.15
IGHV3-42-201ENST00000520410 INO80CQ6PI98 192 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms