RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 TRPM2O94759 1503 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 LMTK2Q8IWU2 1503 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 SYCP2Q9BX26 1530 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 MYOM2P54296 1465 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 YEATS2Q9ULM3 1422 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 POLR3AO14802 1390 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 KANK1Q14678 1352 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 IGLV5-37A0A075B6J1 123 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 IGKV2D-30A0A075B6S6 120 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 FAM237BA0A1B0GVD1 139 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 A0A1W2PQF6 199 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 SNAP23O00161 211 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 TULP2O00295 520 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 HCRTR2O43614 444 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 HNRNPCL1O60812 293 aaKnown RBP3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 ZBED4O75132 1171 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 NDUFS3O75489 264 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 SRCP12931 536 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 DAOP14920 347 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 ZNF12P17014 697 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 HOXC9P31274 260 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 COMPP49747 757 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 EIF5P55010 431 aaKnown RBP3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 F2RL1P55085 397 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 DSCR9P59020 149 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 TUBA1BP68363 451 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 TFAP4Q01664 338 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 BNC1Q01954 994 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 TRAF3Q13114 568 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 KEAP1Q14145 624 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 SIM2Q14190 667 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 ADIPOQQ15848 244 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 CALCRLQ16602 461 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 SOWAHCQ53LP3 525 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 SLC45A4Q5BKX6 768 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 XKR9Q5GH70 373 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 CXorf66Q5JRM2 361 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 TAF3Q5VWG9 929 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 TTI2Q6NXR4 508 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 B3GNT6Q6ZMB0 384 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 KRBA2Q6ZNG9 492 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 PQLC2Q6ZP29 291 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 CREB3L2Q70SY1 520 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 CACNA2D4Q7Z3S7 1137 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 ADHFE1Q8IWW8 467 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 HACE1Q8IYU2 909 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 ANKRD52Q8NB46 1076 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 CREB3L4Q8TEY5 395 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 ARHGEF26Q96DR7 871 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 PERPQ96FX8 193 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 MED30Q96HR3 178 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 HAUS8Q9BT25 410 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 C1QTNF5Q9BXJ0 243 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 PPP1R3EQ9H7J1 279 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 RANGRFQ9HD47 186 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 LTB4R2Q9NPC1 389 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 HCFC1R1Q9NWW0 138 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 TTC7AQ9ULT0 858 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 MTMR6Q9Y217 621 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 ADAM18Q9Y3Q7 739 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 NFS1Q9Y697 457 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 MAU2Q9Y6X3 613 aa3.31□□□□□ -1.88
HMGB1P41-201ENST00000520234 TTC37Q6PGP7 1564 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 ABCC1P33527 1531 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 FANCAO15360 1455 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 hDV102S1A0JD36 115 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 MYO1GB0I1T2 1018 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 SLC28A2O43868 658 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 NDUFS7O75251 213 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 DAB1O75553 588 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 JRKO75564 520 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 NKX2-2O95096 273 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 MLYCDO95822 493 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 FTCDO95954 541 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 CYC1P08574 325 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 CASP2P42575 452 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 FASLGP48023 281 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 CLNS1AP54105 237 aaKnown RBP3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 SEC61BP60468 96 aaKnown RBP3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 CCDC173Q0VFZ6 552 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 KIF5AQ12840 1032 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 GRIK2Q13002 908 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 CRYMQ14894 314 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 MED22Q15528 200 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 CTF1Q16619 201 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 KRTAP27-1Q3LI81 207 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 ATP13A5Q4VNC0 1218 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 TMEM154Q6P9G4 183 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 KCTD18Q6PI47 426 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 RNF168Q8IYW5 571 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 PGBD5Q8N414 524 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 ZNF114Q8NC26 417 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 NUDCD2Q8WVJ2 157 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 TMED6Q8WW62 240 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 USP6NLQ92738 828 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 RTP4Q96DX8 246 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 RRNAD1Q96FB5 475 aaKnown RBP3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 TIGD1Q96MW7 591 aa3.3□□□□□ -1.88
HMGB1P41-201ENST00000520234 OR1F2PQ96R84 312 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms