RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 PDX1P52945 283 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 PCBP4P57723 403 aaKnown RBP12.63□□□□□ -0.39
MCPH1-202ENST00000519221 CCL7P80098 99 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 MPP3Q13368 585 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 NOMO1Q15155 1222 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 LLGL1Q15334 1064 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 PCSK7Q16549 785 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 COL28A1Q2UY09 1125 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 C3orf38Q5JPI3 329 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 CCDC181Q5TID7 509 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 SLC30A9Q6PML9 568 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 B4GALNT4Q76KP1 1039 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 PID1Q7Z2X4 250 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 KDELC2Q7Z4H8 507 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 SPRED1Q7Z699 444 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 TRIM74Q86UV6 250 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 TMEM139Q8IV31 216 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 ZNF567Q8N184 647 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 LRRC57Q8N9N7 239 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 ZNF248Q8NDW4 579 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
MCPH1-202ENST00000519221 DCBLD2Q96PD2 775 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 OSBPL8Q9BZF1 889 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 STRADBQ9C0K7 418 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 LACRTQ9GZZ8 138 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 SUDS3Q9H7L9 328 aaPredicted RBP12.63□□□□□ -0.39
MCPH1-202ENST00000519221 SYNDIG1Q9H7V2 258 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 ASCL3Q9NQ33 180 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 HACD3Q9P035 362 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 CNOT6Q9ULM6 557 aaKnown RBP12.63□□□□□ -0.39
MCPH1-202ENST00000519221 SATB2Q9UPW6 733 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 DUSP10Q9Y6W6 482 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 IGSF10Q6WRI0 2623 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 NBEAQ8NFP9 2946 aa12.63□□□□□ -0.39
MCPH1-202ENST00000519221 RHPN2P1A8MT19 583 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 FADS2P1A8MWK0 482 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 GOLGA6L6A8MZA4 724 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 DNAJC6O75061 913 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 NFKB1P19838 968 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 ACTR1BP42025 376 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 INHBCP55103 352 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 WNT3AP56704 352 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 ACTR1AP61163 376 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 B4GALNT1Q00973 533 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 KIF5AQ12840 1032 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 ZNF569Q5MCW4 686 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 ZDHHC20Q5W0Z9 365 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 ITPRIPL1Q6GPH6 555 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 C19orf48Q6RUI8 117 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 KDELC1Q6UW63 502 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 CDKL3Q8IVW4 592 aaPredicted RBP12.62□□□□□ -0.39
MCPH1-202ENST00000519221 SYCE1Q8N0S2 351 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 NAGSQ8N159 534 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 ARL14Q8N4G2 192 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 TRAM1L1Q8N609 369 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 ACRBPQ8NEB7 543 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 DTX3LQ8TDB6 740 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 UBE2Q2Q8WVN8 375 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 HNRNPLLQ8WVV9 542 aaKnown RBP12.62□□□□□ -0.39
MCPH1-202ENST00000519221 TMEM159Q96B96 161 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 HAUS1Q96CS2 278 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 EID2BQ96D98 161 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 SLC46A1Q96NT5 459 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 PLEKHG4BQ96PX9 1271 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 SPATA16Q9BXB7 569 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 HEMGNQ9BXL5 484 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 CARD9Q9H257 536 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 UBP1Q9NZI7 540 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.62□□□□□ -0.39
MCPH1-202ENST00000519221 SHOC2Q9UQ13 582 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 ST14Q9Y5Y6 855 aa12.62□□□□□ -0.39
MCPH1-202ENST00000519221 ZNF106Q9H2Y7 1883 aaKnown RBP12.61□□□□□ -0.39
MCPH1-202ENST00000519221 BPTFQ12830 3046 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 A0A1W2PNU3 283 aaPredicted RBP12.61□□□□□ -0.39
MCPH1-202ENST00000519221 GRID2IPA4D2P6 1211 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 MIF4GDA9UHW6 222 aaKnown RBP12.61□□□□□ -0.39
MCPH1-202ENST00000519221 H7C0C1 242 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 PLD2O14939 933 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 NUAK1O60285 661 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 ANXA9O76027 345 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 STK10O94804 968 aaKnown RBP12.61□□□□□ -0.39
MCPH1-202ENST00000519221 TJP3O95049 919 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 ECEL1O95672 775 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 ATP1A1P05023 1023 aaKnown RBP12.61□□□□□ -0.39
MCPH1-202ENST00000519221 ITGA2BP08514 1039 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 PIRTP0C851 137 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 SLC2A4P14672 509 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 HLA-DPA1P20036 260 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 HMGCLP35914 325 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 ATP5OP48047 213 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 MAZP56270 477 aaKnown RBP12.61□□□□□ -0.39
MCPH1-202ENST00000519221 ZFP36L1Q07352 338 aaKnown RBP12.61□□□□□ -0.39
MCPH1-202ENST00000519221 BIRC2Q13490 618 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 MARK2Q7KZI7 788 aaKnown RBP12.61□□□□□ -0.39
MCPH1-202ENST00000519221 CLEC14AQ86T13 490 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 PDZD3Q86UT5 571 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 SFTPA2Q8IWL1 248 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 GPR26Q8NDV2 337 aa12.61□□□□□ -0.39
MCPH1-202ENST00000519221 ACTL9Q8TC94 416 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms