RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	FGF1	P05230	155 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	RPLP0	P05388	317 aa	Known RBP	23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	PIRT	P0C851	137 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	RBP3	P10745	1247 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	RBL1	P28749	1068 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	ACTR1B	P42025	376 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	LSS	P48449	732 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	ACTR1A	P61163	376 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	PYCR3	Q53H96	274 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	KDELC1	Q6UW63	502 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	LRRC69	Q6ZNQ3	347 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	TRIM74	Q86UV6	250 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	PHYKPL	Q8IUZ5	450 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	CCNJL	Q8IV13	435 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	IPMK	Q8NFU5	416 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	CCL4L1	Q8NHW4	92 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	TMEM74	Q96NL1	305 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	PLEKHG4B	Q96PX9	1271 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	GBA3	Q9H227	469 aa		23.99	■■□□□ 1.43
CNOT7-204	ENST00000518885	NTN3	O00634	580 aa	Predicted RBP	23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	ARHGAP6	O43182	974 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	BRINP1	O60477	761 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	SLC25A14	O95258	325 aa	Predicted RBP	23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	PYGM	P11217	842 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	SLC2A4	P14672	509 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	HMGCL	P35914	325 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	GABRE	P78334	506 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	NRROS	Q86YC3	692 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	ALG3	Q92685	438 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	FGF11	Q92914	225 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	ZNF578	Q96N58	590 aa	Predicted RBP	23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	WDR24	Q96S15	920 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	CARD9	Q9H257	536 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	LRRN3	Q9H3W5	708 aa		23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	SPATS2L	Q9NUQ6	558 aa	Known RBP	23.98	■■□□□ 1.43
CNOT7-204	ENST00000518885	KCNN4	O15554	427 aa		23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	PPFIA2	O75334	1257 aa		23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	FUCA1	P04066	466 aa		23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	RBMS1	P29558	406 aa	Known RBP	23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	MLLT3	P42568	568 aa	Predicted RBP	23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	EIF3I	Q13347	325 aa	Known RBP	23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	SLC1A5	Q15758	541 aa		23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	CLPP	Q16740	277 aa	Predicted RBP	23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	SIRPB2	Q5JXA9	342 aa		23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	ALS2CL	Q60I27	953 aa		23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	MRGPRX2	Q96LB1	330 aa		23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	STN1	Q9H668	368 aa	Known RBP	23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	TRIM39	Q9HCM9	518 aa		23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	THSD1	Q9NS62	852 aa		23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	CNOT6	Q9ULM6	557 aa	Known RBP	23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	PKP3	Q9Y446	797 aa		23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	RNF215	Q9Y6U7	377 aa		23.97	■■□□□ 1.43
CNOT7-204	ENST00000518885	KNTC1	P50748	2209 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	FADS2P1	A8MWK0	482 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885		D6RAR5	112 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	DXO	O77932	396 aa	Known RBP	23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	ATP1A1	P05023	1023 aa	Known RBP	23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	AK4	P27144	223 aa	Predicted RBP	23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	GPR3	P46089	330 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	ERVPABLB-1	P60509	514 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	TBC1D25	Q3MII6	688 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	IGF2-AS	Q6U949	168 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	GLT6D1	Q7Z4J2	308 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	SPRED1	Q7Z699	444 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	SLC25A41	Q8N5S1	370 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885		Q8N9G6	341 aa	Predicted RBP	23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	GPR26	Q8NDV2	337 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	WDR36	Q8NI36	951 aa	Known RBP	23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	SNIP1	Q8TAD8	396 aa	Known RBP	23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	GLYATL1	Q969I3	302 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	OXNAD1	Q96HP4	312 aa	Predicted RBP	23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	PCDHGA8	Q9Y5G5	932 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	ENTPD2	Q9Y5L3	495 aa		23.96	■■□□□ 1.43
CNOT7-204	ENST00000518885	MYLK	Q15746	1914 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885		A0A087WV48	116 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	CCDC187	A0A096LP49	1063 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	VEGFD	O43915	354 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	ECEL1	O95672	775 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	FTCD	O95954	541 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	MPO	P05164	745 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	INHBC	P55103	352 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	CCL7	P80098	99 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	ANKRD20A2	Q5SQ80	823 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	ANKRD20A1	Q5TYW2	823 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	ANKRD20A3	Q5VUR7	823 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	CHST15	Q7LFX5	561 aa	Predicted RBP	23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	C17orf82	Q86X59	251 aa	Predicted RBP	23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	ARL14	Q8N4G2	192 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	AVL9	Q8NBF6	648 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	DTX3L	Q8TDB6	740 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	BLOC1S5	Q8TDH9	187 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	TMEM159	Q96B96	161 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	EID2B	Q96D98	161 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	ATXN7L3B	Q96GX2	97 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	LIN37	Q96GY3	246 aa	Predicted RBP	23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	VPS35	Q96QK1	796 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	TRIM10	Q9UDY6	481 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	RABGEF1	Q9UJ41	708 aa		23.95	■■□□□ 1.42
CNOT7-204	ENST00000518885	GRID2	O43424	1007 aa		23.94	■■□□□ 1.42
CNOT7-204	ENST00000518885	NUAK1	O60285	661 aa		23.94	■■□□□ 1.42

Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms