RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 KATNA1O75449 491 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 C9P02748 559 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 ATP1A1P05023 1023 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 PDHA1P08559 390 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 MAXP61244 160 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 SH3BP2P78314 561 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 PTSQ03393 145 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 DPYSQ14117 519 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 TCP11X2Q5H9J9 407 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 PPP6R3Q5H9R7 873 aaPredicted RBP11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 ERMARDQ5T6L9 678 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 ZNF787Q6DD87 383 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 DCUN1D2Q6PH85 259 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 CHST15Q7LFX5 561 aaPredicted RBP11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 LZTR1Q8N653 840 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 PIH1D2Q8WWB5 315 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 ZNF599Q96NL3 588 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 MGME1Q9BQP7 344 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 OGFRQ9NZT2 677 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 CWC15Q9P013 229 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 ZNHIT2Q9UHR6 403 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 KCNK6Q9Y257 313 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 PPIL1Q9Y3C6 166 aa11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 OAS3Q9Y6K5 1087 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-205ENST00000517904 EIF3CLB5ME19 914 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 KIAA0754O94854 1291 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 ASMTLO95671 621 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 ACP5P13686 325 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 NFKBIAP25963 317 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 EEF1GP26641 437 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 COL8A1P27658 744 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 HSPA9P38646 679 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 NOP2P46087 812 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 NADK2Q4G0N4 442 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 USP45Q70EL2 814 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 ZNF765Q7L2R6 523 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 SLC9B2Q86UD5 537 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 APLFQ8IW19 511 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 MCOLN2Q8IZK6 566 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 EXD1Q8NHP7 514 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 SH3KBP1Q96B97 665 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 STAMBPL1Q96FJ0 436 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 C9orf72Q96LT7 481 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 OR6C1Q96RD1 312 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 EIF3CQ99613 913 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 RIOK2Q9BVS4 552 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 TWSG1Q9GZX9 223 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 STN1Q9H668 368 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 SEPT11Q9NVA2 429 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 VPS18Q9P253 973 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 RCOR3Q9P2K3 495 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 CNOT8Q9UFF9 292 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 CNOT6Q9ULM6 557 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 MAP4K5Q9Y4K4 846 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 PCDHGA6Q9Y5G7 932 aa11.23□□□□□ -0.61
CTNNA1-205ENST00000517904 PIPSLA2A3N6 862 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 GOLGA6L3A6NEY3 463 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 LILRA5A6NI73 299 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 FZD6O60353 706 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 MAFKO60675 156 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 SNX2O60749 519 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 CREG1O75629 220 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 SORBS2O94875 1100 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 NDUFA10O95299 355 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 F3P13726 295 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 PSMA2P25787 234 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 SEPHS1P49903 392 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 UBE2IP63279 158 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 MAMLD1Q13495 774 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 SEMA5AQ13591 1074 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 IHHQ14623 411 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 ARMC12Q5T9G4 340 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 LYSMD3Q7Z3D4 306 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 CSMD2Q7Z408 3487 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 NLRP8Q86W28 1048 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 PLXDC1Q8IUK5 500 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 CT55Q8WUE5 264 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 ELMO2Q96JJ3 720 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 WDR24Q96S15 920 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 RUFY1Q96T51 708 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 AGPAT1Q99943 283 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 HERPUD2Q9BSE4 406 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 EPB41L1Q9H4G0 881 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 ZNF768Q9H5H4 540 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 ETNK2Q9NVF9 386 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 CUEDC1Q9NWM3 386 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 TAS2R14Q9NYV8 317 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 SCHIP1Q9P0W5 487 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 CPNE7Q9UBL6 633 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 KCND3Q9UK17 655 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 SIK3Q9Y2K2 1263 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 CELSR1Q9NYQ6 3014 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 APCP25054 2843 aa11.22□□□□□ -0.61
CTNNA1-205ENST00000517904 AKAP9Q99996 3911 aa11.21□□□□□ -0.61
CTNNA1-205ENST00000517904 KIR2DS5A0A0G2JLQ3 304 aa11.21□□□□□ -0.61
CTNNA1-205ENST00000517904 A0A0G2JNG1 304 aa11.21□□□□□ -0.61
CTNNA1-205ENST00000517904 A0A0J9YYE9 177 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms