RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ZNF135P52742 658 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 SLC10A7Q0GE19 358 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 SYCP1Q15431 976 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 CLEC16AQ2KHT3 1053 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 ARMC12Q5T9G4 340 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 ZNF787Q6DD87 383 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 ARHGAP36Q6ZRI8 547 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 RFX8Q6ZV50 586 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 CHST15Q7LFX5 561 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 ARHGAP12Q8IWW6 846 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 THAP4Q8WY91 577 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 COX14Q96I36 57 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 C9orf72Q96LT7 481 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 NSMCE3Q96MG7 304 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 ABCG8Q9H221 673 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 DHX35Q9H5Z1 703 aaKnown RBP11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 UCK1Q9HA47 277 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 TBC1D29Q9UFV1 150 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 ZNHIT2Q9UHR6 403 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 LNPEPQ9UIQ6 1025 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 PADI1Q9ULC6 663 aa11.35□□□□□ -0.59
TRAPPC9-203ENST00000517667 A6NCN8 305 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 LRCH4O75427 683 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 DNAJB5O75953 348 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 PGLSO95336 258 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 ASMTLO95671 621 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 RNF224P0DH78 156 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 ERCC2P18074 760 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 PTMSP20962 102 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 RPL7AP62424 266 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 TRAF2Q12933 501 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 DNASE1L3Q13609 305 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 ERMARDQ5T6L9 678 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 PAPD7Q5XG87 772 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 DCUN1D2Q6PH85 259 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 MON1BQ7L1V2 547 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 TMEM135Q86UB9 458 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 TSPAN33Q86UF1 283 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 TRIM74Q86UV6 250 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 HPS6Q86YV9 775 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 PHYKPLQ8IUZ5 450 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 RAVER1Q8IY67 606 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 NPWQ8N729 165 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 FNIP1Q8TF40 1166 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 OR6C1Q96RD1 312 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 MGME1Q9BQP7 344 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 SLC25A23Q9BV35 468 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 GPR87Q9BY21 358 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 VPS16Q9H269 839 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 ZNF768Q9H5H4 540 aaKnown RBP11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 RMI1Q9H9A7 625 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 CASS4Q9NQ75 786 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 RCOR3Q9P2K3 495 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 CPNE7Q9UBL6 633 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 CD84Q9UIB8 345 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 DNPEPQ9ULA0 475 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 PPIL1Q9Y3C6 166 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 PCDHGB7Q9Y5F8 929 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 MED13Q9UHV7 2174 aa11.34□□□□□ -0.59
TRAPPC9-203ENST00000517667 TCRBV5S1A1TA0A578 114 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 TTC24A2A3L6 582 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 DNAJC6O75061 913 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 FGF5P12034 268 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 HCAR3P49019 387 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 GFERP55789 205 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 JAM2P57087 298 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 CHRNA6Q15825 494 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 UGT8Q16880 541 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 NADK2Q4G0N4 442 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 LRRC66Q68CR7 880 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 PPP1R3BQ86XI6 285 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 NSMCE1Q8WV22 266 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 SCAMP4Q969E2 229 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 PCDHB18PQ96TA0 734 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 TBC1D10AQ9BXI6 508 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 TRIM55Q9BYV6 548 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 BRD8Q9H0E9 1235 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 GANQ9H2C0 597 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 ACTL8Q9H568 366 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 NOD2Q9HC29 1040 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 MLXIPLQ9NP71 852 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 LHX9Q9NQ69 397 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 ACSS2Q9NR19 701 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 GPATCH2LQ9NWQ4 482 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 G3BP2Q9UN86 482 aaKnown RBP11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 KCNK6Q9Y257 313 aa11.33□□□□□ -0.6
TRAPPC9-203ENST00000517667 WIPF3A6NGB9 483 aa11.32□□□□□ -0.6
TRAPPC9-203ENST00000517667 TCP11X1B4DZS4 312 aa11.32□□□□□ -0.6
TRAPPC9-203ENST00000517667 SNX2O60749 519 aa11.32□□□□□ -0.6
TRAPPC9-203ENST00000517667 DPM1O60762 260 aa11.32□□□□□ -0.6
TRAPPC9-203ENST00000517667 SPAG6O75602 509 aa11.32□□□□□ -0.6
TRAPPC9-203ENST00000517667 RASSF9O75901 435 aa11.32□□□□□ -0.6
TRAPPC9-203ENST00000517667 UBXN7O94888 489 aa11.32□□□□□ -0.6
TRAPPC9-203ENST00000517667 ACP5P13686 325 aa11.32□□□□□ -0.6
TRAPPC9-203ENST00000517667 CTPS1P17812 591 aa11.32□□□□□ -0.6
TRAPPC9-203ENST00000517667 XRCC1P18887 633 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-203ENST00000517667 TNFAIP3P21580 790 aa11.32□□□□□ -0.6
TRAPPC9-203ENST00000517667 ELAVL4P26378 380 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms