RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ACVR2AP27037 513 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 GPR4P46093 362 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SOX4Q06945 474 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 CD69Q07108 199 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC29A2Q14542 456 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 PON2Q15165 354 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 GCNT6Q5T4J0 391 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 TMEM198Q66K66 360 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 NAIF1Q69YI7 327 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 NAPEPLDQ6IQ20 393 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 PODNL1Q6PEZ8 512 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 PSRC1Q6PGN9 363 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 TMEM182Q6ZP80 229 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 GADL1Q6ZQY3 521 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 BEND4Q6ZU67 534 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 NANOGNBQ7Z5D8 188 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 FAM35AQ86V20 835 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 CRYBG2Q8N1P7 616 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 ASCC1Q8N9N2 400 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 BBS10Q8TAM1 723 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 NEU1Q99519 415 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 CCT7Q99832 543 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 IRX2Q9BZI1 471 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 RNF208Q9H0X6 261 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SOX17Q9H6I2 414 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZDHHC18Q9NUE0 388 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 CWC15Q9P013 229 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 MYO1CO00159 1063 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 TULP2O00295 520 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 ARHGEF9O43307 516 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 PAGE4O60829 102 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 PPP1R11O60927 126 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 USP12O75317 370 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 YES1P07947 543 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SRCP12931 536 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 CASRP41180 1078 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SRP54P61011 504 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 UBE2IP63279 158 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 ADORA2A-AS1P86434 159 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 TBL3Q12788 808 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLAQ13239 276 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 TP53BP2Q13625 1128 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 BAATQ14032 418 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 NWD1Q149M9 1564 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SPATA46Q5T0L3 261 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZNF385CQ66K41 422 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLFN13Q68D06 897 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC9A4Q6AI14 798 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 SCARA5Q6ZMJ2 495 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 PARS2Q7L3T8 475 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 BIVMQ86UB2 503 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 CEP57Q86XR8 500 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 RASGEF1AQ8N9B8 481 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 DNAAF3Q8N9W5 541 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 FAM110DQ8TAY7 271 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 BPIFB1Q8TDL5 484 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 CCDC12Q8WUD4 166 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 PDCD6IPQ8WUM4 868 aaKnown RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 RSC1A1Q92681 617 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 ISL2Q96A47 359 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 FAM149B1Q96BN6 582 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 C7orf34Q96L11 122 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 LRFN5Q96NI6 719 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 BPIFA3Q9BQP9 254 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 KLC2Q9H0B6 622 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 PLK3Q9H4B4 646 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 MKKSQ9NPJ1 570 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 PIM2Q9P1W9 311 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 TMEM59LQ9UK28 342 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 CROTQ9UKG9 612 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 ANKRD26Q9UPS8 1709 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 HPSEQ9Y251 543 aa6.27□□□□□ -1.41
TRAPPC11-209ENST00000512476 INSRP06213 1382 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 MON2Q7Z3U7 1717 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC35F4A4IF30 521 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 OOEPA6NGQ2 149 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 H0YIG0 161 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 MAP2K7O14733 419 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 OGTO15294 1046 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 CHADO15335 359 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SEPT4O43236 478 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 STRNO43815 780 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 NOBOXO60393 691 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SELENOFO60613 162 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 CAVIN2O95810 425 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 KRT6BP04259 564 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 IVLP07476 585 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 CHRM2P08172 466 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 MMP9P14780 707 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 ATF2P15336 505 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 VCLP18206 1134 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SHMT1P34896 483 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 KRT6CP48668 564 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 FNTBP49356 437 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 MSANTD2Q6P1R3 559 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SCYL2Q6P3W7 929 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 CYP4V2Q6ZWL3 525 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 RTN4RL2Q86UN3 420 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms