RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 MYO18AQ92614 2054 aaKnown RBP13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 LAMB1P07942 1786 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 NEMP2A6NFY4 417 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 ANKRD66B4E2M5 251 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 EPOP01588 193 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 CMTM8Q8IZV2 173 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 ZBTB2Q8N680 514 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 CENPIQ92674 756 aaPredicted RBP13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 LENG8Q96PV6 779 aaPredicted RBP13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 KIFC1Q9BW19 673 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 TRPC4Q9UBN4 977 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 PRDM4Q9UKN5 801 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 AP3M1Q9Y2T2 418 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 AP4S1Q9Y587 144 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 SNX8Q9Y5X2 465 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 UBXN8O00124 270 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 TRIM38O00635 465 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 PRAMEF11O60813 436 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 KCNH1O95259 989 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 GRIA3P42263 894 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 RPIAP49247 311 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 INPP1P49441 399 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 DPYSQ14117 519 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 CLEC6AQ6EIG7 209 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 ARFGAP1Q8N6T3 406 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 LEMD2Q8NC56 503 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 C3orf58Q8NDZ4 430 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 ITFG1Q8TB96 612 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 OTULINQ96BN8 352 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 UGT2B28Q9BY64 529 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 IMPAD1Q9NX62 359 aa13.04□□□□□ -0.32
PCDHA4-202ENST00000512229 INPPL1O15357 1258 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 SGTAO43765 313 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 GJB5O95377 273 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 CXCR2P25025 360 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 NSG1P42857 185 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 KRT78Q8N1N4 520 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 CPA6Q8N4T0 437 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 ARNTL2Q8WYA1 636 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 RTKNQ9BST9 563 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 IPPKQ9H8X2 491 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 POLR3BQ9NW08 1133 aaPredicted RBP13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 PSAT1Q9Y617 370 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 H3BM21 787 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 MAP3K13O43283 966 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 ITGBL1O95965 494 aaPredicted RBP13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 NTRK1P04629 796 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 PTDSS1P48651 473 aaKnown RBP13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 IRF9Q00978 393 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 TIGD2Q4W5G0 525 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 SPPL2AQ8TCT8 520 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 ACTRT2Q8TDY3 377 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 OVCA2Q8WZ82 227 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 THAP11Q96EK4 314 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 MAGEB10Q96LZ2 347 aaPredicted RBP13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 GPR22Q99680 433 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 SUV39H2Q9H5I1 410 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 TDP1Q9NUW8 608 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 SDK1Q7Z5N4 2213 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 COCHO43405 550 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 NPHS1O60500 1241 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 SLC22A3O75751 556 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 APODP05090 189 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 SLC35G4P0C7Q5 338 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 HPCAL1P37235 193 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 WASP42768 502 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 ECT2LQ008S8 904 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 SEMG2Q02383 582 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 PM20D1Q6GTS8 502 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 DPY19L2P1Q6NXN4 242 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 FAM171BQ6P995 826 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 PAQR3Q6TCH7 311 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 CRTC3Q6UUV7 619 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 PATL1Q86TB9 770 aaKnown RBP13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 STK32CQ86UX6 486 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 ATG16L2Q8NAA4 619 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 GSTCDQ8NEC7 633 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 OR2AP1Q8NGE2 309 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 CEP19Q96LK0 163 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 QRFPRQ96P65 431 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 CCDC3Q9BQI4 270 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 SELENONQ9NZV5 590 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 TMCC3Q9ULS5 477 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 MAPRE3Q9UPY8 281 aa13.03□□□□□ -0.32
PCDHA4-202ENST00000512229 A0A0J9YYE9 177 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 PFDN1O60925 122 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 ATG13O75143 517 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 F7P08709 466 aaPredicted RBP13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 SYN1P17600 705 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 HSPA7P48741 367 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 SLC7A2P52569 658 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 AP5B1Q2VPB7 878 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 LSM12Q3MHD2 195 aaKnown RBP13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 TIFABQ6ZNK6 161 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 GPR180Q86V85 440 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 TWIST2Q8WVJ9 160 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 PTCD3Q96EY7 689 aaKnown RBP13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 NPAS2Q99743 824 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 ZNF711Q9Y462 761 aa13.02□□□□□ -0.32
PCDHA4-202ENST00000512229 A0A0D9SEW6 157 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms