RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 BUD23O43709 281 aaKnown RBP16.36■□□□□ 0.21
DDX41-213ENST00000512027 TLX3O43711 291 aaPredicted RBP16.36■□□□□ 0.21
DDX41-213ENST00000512027 BRINP1O60477 761 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 MPOP05164 745 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 FGF1P05230 155 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 BPIP17213 487 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 PSMB4P28070 264 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 ACTR1BP42025 376 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 ACTR1AP61163 376 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 HLTFQ14527 1009 aaKnown RBP eCLIP16.36■□□□□ 0.21
DDX41-213ENST00000512027 ISXQ2M1V0 245 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 C14orf28Q4W4Y0 310 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 PYCR3Q53H96 274 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 CERCAMQ5T4B2 595 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 CCDC70Q6NSX1 233 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 SYCE1Q8N0S2 351 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 CACTIN-AS1Q8N1I8 211 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 UBL4BQ8N7F7 174 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 CCDC110Q8TBZ0 833 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 ZDHHC1Q8WTX9 485 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 SCARF2Q96GP6 870 aaPredicted RBP16.36■□□□□ 0.21
DDX41-213ENST00000512027 ATXN7L3BQ96GX2 97 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 VAT1Q99536 393 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 APOL2Q9BQE5 337 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 FICDQ9BVA6 458 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 NRSN2Q9GZP1 204 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 GBA3Q9H227 469 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 DKK4Q9UBT3 224 aa16.36■□□□□ 0.21
DDX41-213ENST00000512027 A0A1W2PQM1 296 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 MIF4GDA9UHW6 222 aaKnown RBP16.35■□□□□ 0.21
DDX41-213ENST00000512027 AGRPO00253 132 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 NTN3O00634 580 aaPredicted RBP16.35■□□□□ 0.21
DDX41-213ENST00000512027 GPR39O43194 453 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 DNAJC6O75061 913 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 TJP3O95049 919 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 ECEL1O95672 775 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 AGTP01019 485 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 RPLP0P05388 317 aaKnown RBP16.35■□□□□ 0.21
DDX41-213ENST00000512027 PYGLP06737 847 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 GSDMDP57764 484 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 SPIDRQ14159 915 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 RTP5Q14D33 572 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 SLC1A5Q15758 541 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 C3orf38Q5JPI3 329 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 ZNF569Q5MCW4 686 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 ANKRD20A2Q5SQ80 823 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 ANKRD20A1Q5TYW2 823 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 ANKRD20A3Q5VUR7 823 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 C19orf48Q6RUI8 117 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 RBM44Q6ZP01 1051 aaKnown RBP16.35■□□□□ 0.21
DDX41-213ENST00000512027 CHST15Q7LFX5 561 aaPredicted RBP16.35■□□□□ 0.21
DDX41-213ENST00000512027 B3GNT8Q7Z7M8 397 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 GALNT13Q8IUC8 556 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 NAGSQ8N159 534 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 TXLNBQ8N3L3 684 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 TTC30BQ8N4P2 665 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 BLOC1S5Q8TDH9 187 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 HES6Q96HZ4 224 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 DCBLD2Q96PD2 775 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 CDH19Q9H159 772 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 LRIT1Q9P2V4 623 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 ZNHIT2Q9UHR6 403 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 TRHDEQ9UKU6 1024 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 ATXN7L1Q9ULK2 861 aaPredicted RBP16.35■□□□□ 0.21
DDX41-213ENST00000512027 ENTPD2Q9Y5L3 495 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 UNC13CQ8NB66 2214 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 ZNF106Q9H2Y7 1883 aaKnown RBP16.35■□□□□ 0.21
DDX41-213ENST00000512027 ADAMTS20P59510 1910 aa16.35■□□□□ 0.21
DDX41-213ENST00000512027 TRBV23OR9-2A0A075B6M9 112 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 RGSL1A5PLK6 1076 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 MTX2O75431 263 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 EML2O95834 649 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 PTMAP06454 111 aaKnown RBP16.34■□□□□ 0.21
DDX41-213ENST00000512027 CETN2P41208 172 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 GABREP78334 506 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 MPP3Q13368 585 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 PTPRCAPQ14761 206 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 CCNJLQ8IV13 435 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 RAVER1Q8IY67 606 aaKnown RBP16.34■□□□□ 0.21
DDX41-213ENST00000512027 GFM1Q96RP9 751 aaKnown RBP16.34■□□□□ 0.21
DDX41-213ENST00000512027 FSD1LQ9BXM9 530 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 FOXP3Q9BZS1 431 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 OR2AG1Q9H205 316 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 ATXN10Q9UBB4 475 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 TMPRSS11EQ9UL52 423 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 SATB2Q9UPW6 733 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 KCNK6Q9Y257 313 aa16.34■□□□□ 0.21
DDX41-213ENST00000512027 URB1O60287 2271 aaKnown RBP16.34■□□□□ 0.21
DDX41-213ENST00000512027 ARHGAP6O43182 974 aa16.33■□□□□ 0.2
DDX41-213ENST00000512027 SLC25A14O95258 325 aaPredicted RBP16.33■□□□□ 0.2
DDX41-213ENST00000512027 ACP5P13686 325 aa16.33■□□□□ 0.2
DDX41-213ENST00000512027 GLB1P16278 677 aa16.33■□□□□ 0.2
DDX41-213ENST00000512027 ZNF8P17098 575 aaPredicted RBP16.33■□□□□ 0.2
DDX41-213ENST00000512027 CA5AP35218 305 aa16.33■□□□□ 0.2
DDX41-213ENST00000512027 GEMP55040 296 aa16.33■□□□□ 0.2
DDX41-213ENST00000512027 GDF10P55107 478 aa16.33■□□□□ 0.2
DDX41-213ENST00000512027 DCDC1P59894 354 aa16.33■□□□□ 0.2
DDX41-213ENST00000512027 KLF1Q13351 362 aaPredicted RBP16.33■□□□□ 0.2
DDX41-213ENST00000512027 SPARCL1Q14515 664 aa16.33■□□□□ 0.2
DDX41-213ENST00000512027 PLA2G4EQ3MJ16 856 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms