RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 SCRN2Q96FV2 425 aa16.38■□□□□ 0.21
CXCL3-204ENST00000511669 ZDHHC6Q9H6R6 413 aa16.38■□□□□ 0.21
CXCL3-204ENST00000511669 ASB8Q9H765 288 aa16.38■□□□□ 0.21
CXCL3-204ENST00000511669 PFDN4Q9NQP4 134 aa16.38■□□□□ 0.21
CXCL3-204ENST00000511669 ZDHHC2Q9UIJ5 367 aa16.38■□□□□ 0.21
CXCL3-204ENST00000511669 HCFC2Q9Y5Z7 792 aa16.38■□□□□ 0.21
CXCL3-204ENST00000511669 NUMBLQ9Y6R0 609 aa16.38■□□□□ 0.21
CXCL3-204ENST00000511669 ZNF106Q9H2Y7 1883 aaKnown RBP16.38■□□□□ 0.21
CXCL3-204ENST00000511669 SUPT3HB4E1H0 165 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 WASH3PC4AMC7 463 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 BNIP3LO60238 219 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 SUPT3HO75486 399 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 SRPRAP08240 638 aaKnown RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 STK19P49842 368 aaPredicted RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 VASPP50552 380 aaPredicted RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 KDSRQ06136 332 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 NFATC2Q13469 925 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 PIANPQ8IYJ0 282 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 LSMEM2Q8N112 164 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 FBXO39Q8N4B4 442 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 CEP70Q8NHQ1 597 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 GRIN3AQ8TCU5 1115 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 PPP2R3CQ969Q6 453 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 BIRC8Q96P09 236 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 OSBPL1AQ9BXW6 950 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 SFXN1Q9H9B4 322 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 ERVW-1Q9UQF0 538 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 GIPC1O14908 333 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 CHUKO15111 745 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 GSC2O15499 205 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 MAGEC1O60732 1142 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 SNX2O60749 519 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 ZNF821O75541 412 aaPredicted RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 CIB2O75838 187 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 S100BP04271 92 aaPredicted RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 CA3P07451 260 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 ZNF30P17039 623 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 CEBPBP17676 345 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 CCND1P24385 295 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 CTSOP43234 321 aaPredicted RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 ST8SIA6P61647 398 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 NTHL1P78549 312 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 CAMK1Q14012 370 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 UBAP2LQ14157 1087 aaKnown RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 SLC9B1Q4ZJI4 515 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 ZNF697Q5TEC3 545 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 VWA5B1Q5TIE3 1220 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 NXNQ6DKJ4 435 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 FAM151BQ6UXP7 276 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 GDPD4Q6W3E5 623 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 EFL1Q7Z2Z2 1120 aaKnown RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 KIAA0907Q7Z7F0 614 aaPredicted RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 CUZD1Q86UP6 607 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 TREML1Q86YW5 311 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 ADGRG2Q8IZP9 1017 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 PTGR2Q8N8N7 351 aaPredicted RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 EXT2Q93063 718 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 PTERQ96BW5 349 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 PRR11Q96HE9 360 aaPredicted RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 LRIG1Q96JA1 1093 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 ATOH8Q96SQ7 321 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 HEPHQ9BQS7 1158 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 NUF2Q9BZD4 464 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 P2RY12Q9H244 342 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 DZANK1Q9NVP4 752 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 DUS2Q9NX74 493 aaKnown RBP16.37■□□□□ 0.21
CXCL3-204ENST00000511669 TAS2R1Q9NYW7 299 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 DHRS7Q9Y394 339 aa16.37■□□□□ 0.21
CXCL3-204ENST00000511669 NEMP2A6NFY4 417 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 E9PBE3 544 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 STX16-NPEPL1H3BU86 382 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 NRG2O14511 850 aaPredicted RBP16.36■□□□□ 0.21
CXCL3-204ENST00000511669 STX16O14662 325 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 GRID2O43424 1007 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 KLHL41O60662 606 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 CLDN7O95471 211 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 NFATC1O95644 943 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 PRSS56P0CW18 603 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 THRAP10827 490 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 SP100P23497 879 aaPredicted RBP16.36■□□□□ 0.21
CXCL3-204ENST00000511669 ACRV1P26436 265 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 PGM1P36871 562 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 TIAL1Q01085 375 aaKnown RBP eCLIP16.36■□□□□ 0.21
CXCL3-204ENST00000511669 ARHGEF7Q14155 803 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 PDCD2Q16342 344 aaPredicted RBP16.36■□□□□ 0.21
CXCL3-204ENST00000511669 TTLL9Q3SXZ7 439 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 RINLQ6ZS11 566 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 SERPINA9Q86WD7 417 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 KDM1BQ8NB78 822 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 ING5Q8WYH8 240 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 PBXIP1Q96AQ6 731 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 ZNF707Q96C28 371 aaPredicted RBP16.36■□□□□ 0.21
CXCL3-204ENST00000511669 LINGO1Q96FE5 620 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 PDLIM5Q96HC4 596 aaKnown RBP16.36■□□□□ 0.21
CXCL3-204ENST00000511669 PLEKHG4BQ96PX9 1271 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 SMIM14Q96QK8 99 aa16.36■□□□□ 0.21
CXCL3-204ENST00000511669 MCCC1Q96RQ3 725 aaPredicted RBP16.36■□□□□ 0.21
CXCL3-204ENST00000511669 CDCA3Q99618 268 aaPredicted RBP16.36■□□□□ 0.21
CXCL3-204ENST00000511669 CADM1Q9BY67 442 aaKnown RBP16.36■□□□□ 0.21
CXCL3-204ENST00000511669 NDE1Q9NXR1 346 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms