RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 PMS2CLQ68D20 193 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 NAPEPLDQ6IQ20 393 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 HIBCHQ6NVY1 386 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 LRRC8BQ6P9F7 803 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 NAPRTQ6XQN6 538 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 GCNT7Q6ZNI0 430 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 PRR23CQ6ZRP0 262 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 USP30Q70CQ3 517 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TAS2R42Q7RTR8 314 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 NDUFAF2Q8N183 169 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 PPHLN1Q8NEY8 458 aaKnown RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 OR13H1Q8NG92 308 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 OR6P1Q8NGX9 317 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 GDAP1Q8TB36 358 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 CCHCR1Q8TD31 782 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 UBE2Q2Q8WVN8 375 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 HDAC10Q969S8 669 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 FAM136AQ96C01 138 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 AP2M1Q96CW1 435 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 MFSD3Q96ES6 412 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 LRIG1Q96JA1 1093 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TBATAQ96M53 351 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 FCRL3Q96P31 734 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 GTPBP2Q9BX10 602 aaKnown RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 LGR4Q9BXB1 951 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 SPATA16Q9BXB7 569 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 L2HGDHQ9H9P8 463 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 ZFYVE1Q9HBF4 777 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 GPAMQ9HCL2 828 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 PREBQ9HCU5 417 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TM9SF3Q9HD45 589 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 MRPL40Q9NQ50 206 aaKnown RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 VPS45Q9NRW7 570 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 FEZ2Q9UHY8 353 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 GMEB2Q9UKD1 530 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 FZD4Q9ULV1 537 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 NFU1Q9UMS0 254 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 SCML1Q9UN30 329 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 SMG5Q9UPR3 1016 aaKnown RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 PLXND1Q9Y4D7 1925 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 SERTM1A2A2V5 107 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TP73O15350 636 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 PSMD3O43242 534 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TSPAN6O43657 245 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 LDB2O43679 373 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 SUN1O94901 812 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 ASMTLO95671 621 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 GOT2P00505 430 aaKnown RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 IGLV3-19P01714 112 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 CELA2BP08218 269 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 MYBL2P10244 700 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 ERVK-10P10266 1014 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 MYF5P13349 255 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TPSB2P20231 275 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 LPOP22079 712 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 MC4RP32245 332 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 GPR1P46091 355 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 SPINT3P49223 89 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 ZNF140P52738 457 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 PGGT1BP53609 377 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 CSE1LP55060 971 aaKnown RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 PSMA6P60900 246 aaKnown RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 SPEM2Q0P670 501 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 CDH17Q12864 832 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 SFSWAPQ12872 951 aaKnown RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 MSLNQ13421 630 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 C1orf61Q13536 156 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TUBB2AQ13885 445 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 SEMA3AQ14563 771 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 EFTUD2Q15029 972 aaKnown RBP eCLIP5.38□□□□□ -1.55
PROM1-211ENST00000511153 LRRC14Q15048 493 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TEAD4Q15561 434 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TPSAB1Q15661 275 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 ELF2Q15723 593 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 ATP13A5Q4VNC0 1218 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 KHDC1Q4VXA5 237 aaKnown RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 SETMARQ53H47 684 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 RALGPS1Q5JS13 557 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 ZC3H14Q6PJT7 736 aaKnown RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 CRTC3Q6UUV7 619 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 SLC36A4Q6YBV0 504 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 Q6ZSR6 202 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 SYDE1Q6ZW31 735 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 TMC3Q7Z5M5 1100 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 HEATR4Q86WZ0 1026 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 ZBED8Q8IZ13 594 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TP53I13Q8NBR0 393 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 FBXO36Q8NEA4 188 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 SLCO2A1Q92959 643 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TSACCQ96A04 125 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 RAB7BQ96AH8 199 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 DTD2Q96FN9 168 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 BMFQ96LC9 184 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 COQ10AQ96MF6 247 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 RUNDC3BQ96NL0 473 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 MCCC1Q96RQ3 725 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 KLF6Q99612 283 aaPredicted RBP5.38□□□□□ -1.55
PROM1-211ENST00000511153 ORAI3Q9BRQ5 295 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 IER2Q9BTL4 223 aa5.38□□□□□ -1.55
PROM1-211ENST00000511153 TUBB2BQ9BVA1 445 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms