RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ATP13A5Q4VNC0 1218 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 PYCR3Q53H96 274 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 HES3Q5TGS1 186 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 ITPRIPL1Q6GPH6 555 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 CCNI2Q6ZMN8 369 aaPredicted RBP13.46□□□□□ -0.25
SNF8-206ENST00000509989 TAF8Q7Z7C8 310 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 PDCD7Q8N8D1 485 aaKnown RBP13.46□□□□□ -0.25
SNF8-206ENST00000509989 TTC13Q8NBP0 860 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 TRIM58Q8NG06 486 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 OR13C4Q8NGS5 318 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 IFI44Q8TCB0 444 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 CCHCR1Q8TD31 782 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 GPBAR1Q8TDU6 330 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 SCARF2Q96GP6 870 aaPredicted RBP13.46□□□□□ -0.25
SNF8-206ENST00000509989 TBATAQ96M53 351 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 ALS2CR12Q96Q35 445 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 TBL1YQ9BQ87 522 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 SPATA16Q9BXB7 569 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 IL26Q9NPH9 171 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 ATXN10Q9UBB4 475 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 GPR34Q9UPC5 381 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 MSRB2Q9Y3D2 182 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 GPSM3Q9Y4H4 160 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 NEUROG3Q9Y4Z2 214 aa13.46□□□□□ -0.25
SNF8-206ENST00000509989 PIKFYVEQ9Y2I7 2098 aa13.46□□□□□ -0.26
SNF8-206ENST00000509989 TRBV23OR9-2A0A075B6M9 112 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 CCDC78A2IDD5 438 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 PMS2P1A4D2B8 440 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 B4DGG1 531 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 FANCGO15287 622 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 ANXA9O76027 345 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 TRIM16O95361 564 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 CAPNS1P04632 268 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 FGF1P05230 155 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 IVLP07476 585 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 PRSS56P0CW18 603 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 ALPPL2P10696 532 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 ZNF8P17098 575 aaPredicted RBP13.45□□□□□ -0.26
SNF8-206ENST00000509989 HLA-DPA1P20036 260 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 BLKP51451 505 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 MAZP56270 477 aaKnown RBP13.45□□□□□ -0.26
SNF8-206ENST00000509989 TMPRSS15P98073 1019 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 ELOCQ15369 112 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 CHRNA6Q15825 494 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 PARP6Q2NL67 630 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 ZNF569Q5MCW4 686 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 CCDC70Q6NSX1 233 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 SLC30A9Q6PML9 568 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 ARHGEF18Q6ZSZ5 1173 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 ADGRG6Q86SQ4 1221 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 FSTL5Q8N475 847 aaPredicted RBP13.45□□□□□ -0.26
SNF8-206ENST00000509989 PRELID2Q8N945 189 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 FAM46DQ8NEK8 389 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 GPR156Q8NFN8 814 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 COG1Q8WTW3 980 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 RTP4Q96DX8 246 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 FSD1LQ9BXM9 530 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 ETNK1Q9HBU6 452 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 PADI4Q9UM07 663 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 PCDHGA1Q9Y5H4 931 aa13.45□□□□□ -0.26
SNF8-206ENST00000509989 EME2A4GXA9 379 aaPredicted RBP13.44□□□□□ -0.26
SNF8-206ENST00000509989 ZNF185O15231 689 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 OPA1O60313 960 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 IFNB1P01574 187 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 KELP23276 732 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 RPL22P35268 128 aaKnown RBP13.44□□□□□ -0.26
SNF8-206ENST00000509989 HMGCLP35914 325 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 TARDBPQ13148 414 aaKnown RBP eCLIP13.44□□□□□ -0.26
SNF8-206ENST00000509989 NR0B2Q15466 257 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 PLA2G4EQ3MJ16 856 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 TTC27Q6P3X3 843 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 OGFOD3Q6PK18 319 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 FAM151BQ6UXP7 276 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 UNQ6494/PRO21346Q6UXR6 183 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 GLT6D1Q7Z4J2 308 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 GKN2Q86XP6 184 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 C17orf53Q8N3J3 647 aaPredicted RBP13.44□□□□□ -0.26
SNF8-206ENST00000509989 TRAM1L1Q8N609 369 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 OR4K2Q8NGD2 314 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 ATL2Q8NHH9 583 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 CCDC74AQ96AQ1 378 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 DUSP23Q9BVJ7 150 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 OR2AG1Q9H205 316 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 KCTD5Q9NXV2 234 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 TAAR2Q9P1P5 351 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 SLC23A2Q9UGH3 650 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 ZNHIT2Q9UHR6 403 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 FKBPLQ9UIM3 349 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 DOLKQ9UPQ8 538 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 ZNF148Q9UQR1 794 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 PCDHB1Q9Y5F3 818 aa13.44□□□□□ -0.26
SNF8-206ENST00000509989 A0A1W2PNU3 283 aaPredicted RBP13.43□□□□□ -0.26
SNF8-206ENST00000509989 RGSL1A5PLK6 1076 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 TAF4O00268 1085 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 LDB2O43679 373 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 STK10O94804 968 aaKnown RBP13.43□□□□□ -0.26
SNF8-206ENST00000509989 CDKN1CP49918 316 aaPredicted RBP13.43□□□□□ -0.26
SNF8-206ENST00000509989 TERF1P54274 439 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 DCDC1P59894 354 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 LONRF2Q1L5Z9 754 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms