RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 KLHDC8BQ8IXV7 354 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 TRAM1L1Q8N609 369 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 KYQ8NBH2 561 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 DTX3LQ8TDB6 740 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 NAT6Q93015 286 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 SPATA13Q96N96 652 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 SPATA16Q9BXB7 569 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 GSDMCQ9BYG8 508 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 DPEP2Q9H4A9 486 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 TRIM39Q9HCM9 518 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 BPIFA1Q9NP55 256 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 IL17CQ9P0M4 197 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 TAAR2Q9P1P5 351 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 DKK4Q9UBT3 224 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 RABGEF1Q9UJ41 708 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 ZMIZ1Q9ULJ6 1067 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 AAR2Q9Y312 384 aaKnown RBP16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 GPSM3Q9Y4H4 160 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 MYLKQ15746 1914 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 APC2O95996 2303 aa16.01■□□□□ 0.15
PDLIM5-212ENST00000509333 LRP4O75096 1905 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 ILF3Q12906 894 aaKnown RBP eCLIP16■□□□□ 0.15
PDLIM5-212ENST00000509333 HLTFQ14527 1009 aaKnown RBP eCLIP16■□□□□ 0.15
PDLIM5-212ENST00000509333 RTP5Q14D33 572 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 PARP6Q2NL67 630 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 DENND5AQ6IQ26 1287 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 MARK2Q7KZI7 788 aaKnown RBP16■□□□□ 0.15
PDLIM5-212ENST00000509333 SLC13A5Q86YT5 568 aaPredicted RBP16■□□□□ 0.15
PDLIM5-212ENST00000509333 FAM71DQ8N9W8 422 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 OR6C4Q8NGE1 309 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 MDM1Q8TC05 714 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 CCDC3Q9BQI4 270 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 ZSCAN5AQ9BUG6 496 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 NRSN2Q9GZP1 204 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 CCDC86Q9H6F5 360 aaKnown RBP16■□□□□ 0.15
PDLIM5-212ENST00000509333 SUDS3Q9H7L9 328 aaPredicted RBP16■□□□□ 0.15
PDLIM5-212ENST00000509333 IL26Q9NPH9 171 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 LZTFL1Q9NQ48 299 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 HACD3Q9P035 362 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 VPS18Q9P253 973 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 ATXN10Q9UBB4 475 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 ZNHIT2Q9UHR6 403 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 APPL1Q9UKG1 709 aa16■□□□□ 0.15
PDLIM5-212ENST00000509333 NTN3O00634 580 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 NUAK1O60285 661 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 ZNF189O75820 626 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 STK10O94804 968 aaKnown RBP15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 SLC25A14O95258 325 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 METTL18O95568 372 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 PTMAP06454 111 aaKnown RBP15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 GLB1P16278 677 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 PSMB4P28070 264 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 STIP1P31948 543 aaKnown RBP15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 OLIG2Q13516 323 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 PRPSAP1Q14558 356 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 C14orf28Q4W4Y0 310 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 ZNF648Q5T619 568 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 ALS2CLQ60I27 953 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 PDPK2PQ6A1A2 396 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 ARL14Q8N4G2 192 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 GLYATL1Q969I3 302 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 FICDQ9BVA6 458 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 RMI1Q9H9A7 625 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 ARNT2Q9HBZ2 717 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 PPP2R2CQ9Y2T4 447 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 PRKAB1Q9Y478 270 aa15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 KMT2BQ9UMN6 2715 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-212ENST00000509333 A0A1W2PQM1 296 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 SRRM3A6NNA2 597 aaPredicted RBP15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 B4GAT1O43505 415 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 PNLIPP16233 465 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 ZNF8P17098 575 aaPredicted RBP15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 TNNT3P45378 269 aaPredicted RBP15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 GDF10P55107 478 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 CCL7P80098 99 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 SPARCL1Q14515 664 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 PTPRCAPQ14761 206 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 ISXQ2M1V0 245 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 ATP13A5Q4VNC0 1218 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 CERCAMQ5T4B2 595 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 KCTD11Q693B1 232 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 SLC30A9Q6PML9 568 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 ADGRG6Q86SQ4 1221 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 PROSER1Q86XN7 944 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 GALNT13Q8IUC8 556 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 NAGSQ8N159 534 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 BLOC1S5Q8TDH9 187 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 ZDHHC1Q8WTX9 485 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 ZCCHC14Q8WYQ9 949 aaKnown RBP15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 CCDC74AQ96AQ1 378 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 PLEKHG4BQ96PX9 1271 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 OR2M4Q96R27 311 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 APOL2Q9BQE5 337 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 TMEM121Q9BTD3 319 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 TLR10Q9BXR5 811 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 CARD9Q9H257 536 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 ARFGAP3Q9NP61 516 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 LRIT1Q9P2V4 623 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 PCDHB1Q9Y5F3 818 aa15.98■□□□□ 0.15
PDLIM5-212ENST00000509333 RNF215Q9Y6U7 377 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms