RNA–Protein interactions for RNA: ENST00000509290.1

SEL1L3-205, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-205ENST00000509290 LRP12Q9Y561 859 aa4.39□□□□□ -1.71
SEL1L3-205ENST00000509290 CDY1Q9Y6F8 540 aa4.39□□□□□ -1.71
SEL1L3-205ENST00000509290 SCN1AP35498 2009 aa4.39□□□□□ -1.71
SEL1L3-205ENST00000509290 TRIP11Q15643 1979 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 TTC3P53804 2025 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 KPNA7A9QM74 516 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 EIF3CLB5ME19 914 aaKnown RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 H3BNC9 293 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 TULP2O00295 520 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 PODXLO00592 558 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 CYB561D2O14569 222 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ZNF500O60304 480 aaPredicted RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 SRGAP2O75044 1071 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 VNN2O95498 520 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 PDGFRBP09619 1106 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 FERP16591 822 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 UQCRC1P31930 480 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ATICP31939 592 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 USP8P40818 1118 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 SLC11A1P49279 550 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 AARSP49588 968 aaKnown RBP eCLIP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 RAB27AP51159 221 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 AGFG1P52594 562 aaKnown RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 NDST1P52848 882 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 MFAP3P55082 362 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 WDR5P61964 334 aaKnown RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 CFHR1Q03591 330 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ZNF91Q05481 1191 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 SRSF1Q07955 248 aaKnown RBP eCLIP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 KLHL30Q0D2K2 578 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 INCA1Q0VD86 236 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 PTP4A2Q12974 167 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 TRPC3Q13507 836 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 PIN1Q13526 163 aaPredicted RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 TMTC4Q5T4D3 741 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 FAM109BQ6ICB4 259 aaPredicted RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 KCTD20Q7Z5Y7 419 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 PHLDB2Q86SQ0 1253 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ACOT1Q86TX2 421 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 LRRC52Q8N7C0 313 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ZBTB34Q8NCN2 500 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ZNF397Q8NF99 534 aaPredicted RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 BEST2Q8NFU1 509 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ZNF606Q8WXB4 792 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 TAF4BQ92750 862 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 TOP1MTQ969P6 601 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ZNF689Q96CS4 500 aaPredicted RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 IQCDQ96DY2 449 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 B3GALT6Q96L58 329 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 SENP8Q96LD8 212 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 LRGUKQ96M69 825 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 SPAG5Q96R06 1193 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 EIF3CQ99613 913 aaKnown RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 PKMYT1Q99640 499 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 AGPAT1Q99943 283 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ADGRE3Q9BY15 652 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 TRIM7Q9C029 511 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 CWH43Q9H720 699 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ELAC1Q9H777 363 aaKnown RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 TMEM184CQ9NVA4 438 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 TMLHEQ9NVH6 421 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 MARCH5Q9NX47 278 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 TMEM161AQ9NX61 479 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 DNMT3BQ9UBC3 853 aaKnown RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ZMYND8Q9ULU4 1186 aaPredicted RBP4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 COG5Q9UP83 839 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 PAXBP1Q9Y5B6 917 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 SNX9Q9Y5X1 595 aa4.38□□□□□ -1.71
SEL1L3-205ENST00000509290 ALPK3Q96L96 1907 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 CCDC187A0A096LP49 1063 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 MYBPHLA2RUH7 354 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 FAM90A10PA6NDY2 464 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 TMCO5BA8MYB1 307 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 M0QZQ0 153 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 M0R3H8 397 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 O00370 1275 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 CLDN5O00501 218 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 ADAM12O43184 909 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 TBC1D4O60343 1298 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 TACC1O75410 805 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 RNF8O76064 485 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 BEST1O76090 585 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 GALTP07902 379 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 UNGP13051 313 aaPredicted RBP4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 KRT5P13647 590 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 WARSP23381 471 aaKnown RBP4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 ACAT1P24752 427 aaKnown RBP4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 CCKARP32238 428 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 RPL9P32969 192 aaKnown RBP4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 GNL1P36915 607 aaPredicted RBP4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 MAGEA1P43355 309 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 TAF6P49848 677 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 GALCP54803 685 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 TIRAPP58753 221 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 TIAL1Q01085 375 aaKnown RBP eCLIP4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 CDR2Q01850 454 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 CETN1Q12798 172 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 GRIK3Q13003 919 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 RAB32Q13637 225 aa4.37□□□□□ -1.71
SEL1L3-205ENST00000509290 TWIST1Q15672 202 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms