RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 C5orf51A6NDU8 294 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 WIPF3A6NGB9 483 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 A6NL46 340 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 STMND1H3BQB6 276 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 CCDC188H7C350 402 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 I3L1I5 382 aaPredicted RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 EIF3DO15371 548 aaKnown RBP eCLIP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 NME6O75414 186 aaPredicted RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 MTX2O75431 263 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 GASTP01350 101 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 ELANEP08246 267 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 GNAI3P08754 354 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 ABHD2P08910 425 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 PIM1P11309 404 aaPredicted RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 PEPDP12955 493 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 CYP2A7P20853 494 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 SP100P23497 879 aaPredicted RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 SLC6A4P31645 630 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 SFNP31947 248 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 CTNNB1P35222 781 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 USP8P40818 1118 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 PNLIPRP2P54317 469 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 HUNKP57058 714 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 ST8SIA6P61647 398 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 GNAI1P63096 354 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 SIM1P81133 766 aaPredicted RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 SPAG1Q07617 926 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 OVGP1Q12889 678 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 CSHL1Q14406 222 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 TAZQ16635 292 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 DPCR1Q3MIW9 517 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 PABPC1LQ4VXU2 614 aaKnown RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 TEX35Q5T0J7 233 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 ARHGAP17Q68EM7 881 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 ARMC6Q6NXE6 501 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 PSRC1Q6PGN9 363 aaPredicted RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 CES3Q6UWW8 571 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 SEM1Q6ZVN7 128 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 TAS2R42Q7RTR8 314 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 IQCHQ86VS3 1027 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 GAS2L3Q86XJ1 694 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 SLC22A9Q8IVM8 553 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 MAPKAPK5Q8IW41 473 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 PHC2Q8IXK0 858 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 OR4N4Q8N0Y3 316 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF321PQ8N8H1 164 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 EIF1ADQ8N9N8 165 aaKnown RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 AGBL3Q8NEM8 1001 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 OR8K5Q8NH50 307 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 OR8K3Q8NH51 312 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 RNASE8Q8TDE3 154 aaKnown RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 GLMPQ8WWB7 406 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 ARHGAP45Q92619 1136 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 SLAMF9Q96A28 289 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 FAM149B1Q96BN6 582 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 DHX58Q96C10 678 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 CCDC51Q96ER9 411 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 C5orf30Q96GV9 206 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 LRIG1Q96JA1 1093 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 HS6ST2Q96MM7 605 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 MESP1Q9BRJ9 268 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 NUDT22Q9BRQ3 303 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 RIOK1Q9BRS2 568 aaKnown RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 KIFC3Q9BVG8 833 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 CAPS2Q9BXY5 557 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 GPR61Q9BZJ8 451 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 IMPG2Q9BZV3 1241 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 NACA2Q9H009 215 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 C11orf54Q9H0W9 315 aaPredicted RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 GOLPH3LQ9H4A5 285 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 OSGEPL1Q9H4B0 414 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 TFB2MQ9H5Q4 396 aaKnown RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 XKR8Q9H6D3 395 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 GPR35Q9HC97 309 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 PRMT8Q9NR22 394 aaPredicted RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 RRP7BPQ9NSQ0 103 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 TMEM140Q9NV12 185 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 OLAHQ9NV23 265 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 RNF7Q9UBF6 113 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 TRPC4Q9UBN4 977 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 GMEB2Q9UKD1 530 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 FBXW2Q9UKT8 454 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 CCPG1Q9ULG6 757 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 NFU1Q9UMS0 254 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 SUFUQ9UMX1 484 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 OSGIN2Q9Y236 505 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 NUDCQ9Y266 331 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 DLGAP4Q9Y2H0 992 aa4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 R3HDM2Q9Y2K5 976 aaKnown RBP4.32□□□□□ -1.72
SMARCA5-202ENST00000508573 ACEP12821 1306 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 MAP3K19Q56UN5 1328 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 CENPJQ9HC77 1338 aaPredicted RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 MFSD2BA6NFX1 497 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 LRRC3CA6NJW4 275 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 MARCH11A6NNE9 402 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF785A8K8V0 405 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 F8WDY8 70 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 M0QYG6 137 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 SNAP23O00161 211 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms