RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 PISDQ9UG56 409 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 TFR2Q9UP52 801 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 PRKAB1Q9Y478 270 aa16.1■□□□□ 0.17
LMNA-222ENST00000508500 PIEZO2Q9H5I5 2752 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 CPNE6O95741 557 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 PIRTP0C851 137 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 TNNT1P13805 278 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 COMTP21964 271 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 ALDH4A1P30038 563 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 UCNP55089 124 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 VAC14Q08AM6 782 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 SRSF6Q13247 344 aaKnown RBP16.09■□□□□ 0.17
LMNA-222ENST00000508500 TAZQ16635 292 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 AMZ1Q400G9 498 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 NKAIN2Q5VXU1 208 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 LYSMD3Q7Z3D4 306 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 KDELC2Q7Z4H8 507 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 TC2NQ8N9U0 490 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 TTC9Q92623 222 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 AGAP3Q96P47 875 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 CDH19Q9H159 772 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 ACSL6Q9UKU0 697 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 DNPEPQ9ULA0 475 aa16.09■□□□□ 0.17
LMNA-222ENST00000508500 TRBV23OR9-2A0A075B6M9 112 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 PRAMEF33A0A0G2JMD5 474 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 IGHV5-10-1A0A0J9YXX1 117 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 RHPN2P1A8MT19 583 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 AKR1B15C9JRZ8 316 aaPredicted RBP16.08■□□□□ 0.16
LMNA-222ENST00000508500 K7ENP7 123 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 PRAMEF10O60809 474 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 ASMTLO95671 621 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 MT-CYBP00156 380 aaPredicted RBP16.08■□□□□ 0.16
LMNA-222ENST00000508500 PYGLP06737 847 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 CA4P22748 312 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 CDKN2BP42772 138 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 DYNLT1P63172 113 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 PDK1Q15118 436 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 LLGL1Q15334 1064 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 ZNF648Q5T619 568 aaPredicted RBP16.08■□□□□ 0.16
LMNA-222ENST00000508500 INO80CQ6PI98 192 aaPredicted RBP16.08■□□□□ 0.16
LMNA-222ENST00000508500 PIM3Q86V86 326 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 RFX6Q8HWS3 928 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 RHOT1Q8IXI2 618 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 RCBTB1Q8NDN9 531 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 GPR26Q8NDV2 337 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 SPATA22Q8NHS9 363 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.08■□□□□ 0.16
LMNA-222ENST00000508500 SLC37A2Q8TED4 501 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 CCDC97Q96F63 343 aaPredicted RBP16.08■□□□□ 0.16
LMNA-222ENST00000508500 ZNF830Q96NB3 372 aaPredicted RBP16.08■□□□□ 0.16
LMNA-222ENST00000508500 SEMA4CQ9C0C4 833 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 FAM83DQ9H4H8 585 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 FOXJ2Q9P0K8 574 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 TMEM9Q9P0T7 183 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 VPS18Q9P253 973 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 IMPACTQ9P2X3 320 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 INTUQ9ULD6 942 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 MYO18BQ8IUG5 2567 aa16.08■□□□□ 0.16
LMNA-222ENST00000508500 IGHV1OR21-1A0A087WYE8 117 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 C9orf172C9J069 976 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 NVLO15381 856 aaKnown RBP16.07■□□□□ 0.16
LMNA-222ENST00000508500 JMJD7P0C870 316 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 CCL4P13236 92 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 PECAM1P16284 738 aaPredicted RBP16.07■□□□□ 0.16
LMNA-222ENST00000508500 CSF2RBP32927 897 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 CD68P34810 354 aaPredicted RBP16.07■□□□□ 0.16
LMNA-222ENST00000508500 SLC1A1P43005 524 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 GPR3P46089 330 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 ARSDP51689 593 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 HADHBP55084 474 aaKnown RBP16.07■□□□□ 0.16
LMNA-222ENST00000508500 SQSTM1Q13501 440 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 MAP9Q49MG5 647 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 TEX44Q53QW1 395 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 PHF19Q5T6S3 580 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 TMC3Q7Z5M5 1100 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 NT5DC3Q86UY8 548 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 ZNF761Q86XN6 746 aaPredicted RBP16.07■□□□□ 0.16
LMNA-222ENST00000508500 JAMLQ86YT9 394 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 GALNT13Q8IUC8 556 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 SFRP1Q8N474 314 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 USP7Q93009 1102 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 PMEPA1Q969W9 287 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 MAK16Q9BXY0 300 aaKnown RBP16.07■□□□□ 0.16
LMNA-222ENST00000508500 SLC25A51Q9H1U9 297 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 ARFGAP3Q9NP61 516 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 HAUS2Q9NVX0 235 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 DDX56Q9NY93 547 aaKnown RBP16.07■□□□□ 0.16
LMNA-222ENST00000508500 PKD2L2Q9NZM6 624 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 SEPT10Q9P0V9 454 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 ZNHIT2Q9UHR6 403 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 SHOC2Q9UQ13 582 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 SPO11Q9Y5K1 396 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 ADGRG1Q9Y653 693 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 ALG6Q9Y672 507 aa16.07■□□□□ 0.16
LMNA-222ENST00000508500 RGSL1A5PLK6 1076 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 A6NCN8 305 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 AURKAO14965 403 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 LCA5LO95447 670 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 TPM1P09493 284 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms