RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 GLYATL1Q969I3 302 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 VPS35Q96QK1 796 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 TRIM39Q9HCM9 518 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 TAAR2Q9P1P5 351 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 CNOT6Q9ULM6 557 aaKnown RBP19.72■□□□□ 0.75
SFXN1-209ENST00000508290 PKP3Q9Y446 797 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 GPSM3Q9Y4H4 160 aa19.72■□□□□ 0.75
SFXN1-209ENST00000508290 TDRD6O60522 2096 aaKnown RBP19.72■□□□□ 0.75
SFXN1-209ENST00000508290 FADS2P1A8MWK0 482 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 B4DGG1 531 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 VEGFDO43915 354 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 NOBOXO60393 691 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 SLC25A14O95258 325 aaPredicted RBP19.71■□□□□ 0.75
SFXN1-209ENST00000508290 FUCA1P04066 466 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 BPIP17213 487 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 STIP1P31948 543 aaKnown RBP19.71■□□□□ 0.75
SFXN1-209ENST00000508290 POLD2P49005 469 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 SPIDRQ14159 915 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 RPS6KA1Q15418 735 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 RANBP10Q6VN20 620 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 ARHGEF18Q6ZSZ5 1173 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 NYAP1Q6ZVC0 841 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 GLT6D1Q7Z4J2 308 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 NRROSQ86YC3 692 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 ZDHHC1Q8WTX9 485 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 CCDC74AQ96AQ1 378 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 GRPEL1Q9HAV7 217 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 TMEM98Q9Y2Y6 226 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 SPO11Q9Y5K1 396 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 MAP1BP46821 2468 aaKnown RBP19.71■□□□□ 0.75
SFXN1-209ENST00000508290 AKAP13Q12802 2813 aa19.71■□□□□ 0.75
SFXN1-209ENST00000508290 IGF2RP11717 2491 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 C2orf81A6NN90 581 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 PSMD3O43242 534 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 NUAK1O60285 661 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 DNAJC6O75061 913 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 CSO75390 466 aaKnown RBP19.7■□□□□ 0.74
SFXN1-209ENST00000508290 SLC4A1P02730 911 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 SLC2A4P14672 509 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 ACTR1BP42025 376 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 ACTR1AP61163 376 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 CCZ1BP86790 482 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 CCZ1P86791 482 aaPredicted RBP19.7■□□□□ 0.74
SFXN1-209ENST00000508290 TCEA2Q15560 299 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 ISXQ2M1V0 245 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 PARP6Q2NL67 630 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 PERM1Q5SV97 790 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 MEI1Q5TIA1 1274 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 TRIM74Q86UV6 250 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 KLHDC8BQ8IXV7 354 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 TTC30BQ8N4P2 665 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 SLC25A41Q8N5S1 370 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 AVL9Q8NBF6 648 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 CCL4L1Q8NHW4 92 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 BRSK1Q8TDC3 778 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 BLOC1S5Q8TDH9 187 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 ZCCHC2Q9C0B9 1178 aaKnown RBP19.7■□□□□ 0.74
SFXN1-209ENST00000508290 ARNT2Q9HBZ2 717 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 IL17CQ9P0M4 197 aa19.7■□□□□ 0.74
SFXN1-209ENST00000508290 USP24Q9UPU5 2620 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 GOLGA6L3A6NEY3 463 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 NTN3O00634 580 aaPredicted RBP19.69■□□□□ 0.74
SFXN1-209ENST00000508290 CRTAMO95727 393 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 PSMB4P28070 264 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 ADRA1AP35348 466 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 SPAM1P38567 509 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 MLLT3P42568 568 aaPredicted RBP19.69■□□□□ 0.74
SFXN1-209ENST00000508290 CHRNA4P43681 627 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 BIRC2Q13490 618 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 ITGA9Q13797 1035 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 ALS2CLQ60I27 953 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 SLC30A9Q6PML9 568 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 MARK2Q7KZI7 788 aaKnown RBP19.69■□□□□ 0.74
SFXN1-209ENST00000508290 CCDC110Q8TBZ0 833 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 MAIP1Q8WWC4 291 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 RTP4Q96DX8 246 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 FICDQ9BVA6 458 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 SUDS3Q9H7L9 328 aaPredicted RBP19.69■□□□□ 0.74
SFXN1-209ENST00000508290 C10orf88Q9H8K7 445 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 LZTFL1Q9NQ48 299 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 SPATS2LQ9NUQ6 558 aaKnown RBP19.69■□□□□ 0.74
SFXN1-209ENST00000508290 LRIT1Q9P2V4 623 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 ZNHIT2Q9UHR6 403 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 ZKSCAN5Q9Y2L8 839 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 AK5Q9Y6K8 562 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 FRYQ5TBA9 3013 aa19.69■□□□□ 0.74
SFXN1-209ENST00000508290 SPEGQ15772 3267 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 ERI2A8K979 691 aaKnown RBP19.68■□□□□ 0.74
SFXN1-209ENST00000508290 ATP1A1P05023 1023 aaKnown RBP19.68■□□□□ 0.74
SFXN1-209ENST00000508290 GPR3P46089 330 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 CLCNKAP51800 687 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 CYP4F3Q08477 520 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 EIF3IQ13347 325 aaKnown RBP19.68■□□□□ 0.74
SFXN1-209ENST00000508290 NR1D2Q14995 579 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 TAF1AQ15573 450 aaPredicted RBP19.68■□□□□ 0.74
SFXN1-209ENST00000508290 IGF2-ASQ6U949 168 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 ZNF438Q7Z4V0 828 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 SLC13A5Q86YT5 568 aaPredicted RBP19.68■□□□□ 0.74
SFXN1-209ENST00000508290 CCNJLQ8IV13 435 aa19.68■□□□□ 0.74
SFXN1-209ENST00000508290 FAM71DQ8N9W8 422 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms