RNA–Protein interactions for RNA: ENST00000507655.5

SSBP2-208, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-208ENST00000507655 OLIG2Q13516 323 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 CAMK2BQ13554 666 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 SIX1Q15475 284 aaPredicted RBP17.89■□□□□ 0.45
SSBP2-208ENST00000507655 PARP6Q2NL67 630 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 PYCR3Q53H96 274 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 ALS2CLQ60I27 953 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 KCTD11Q693B1 232 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 ARHGEF18Q6ZSZ5 1173 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 EFL1Q7Z2Z2 1120 aaKnown RBP17.89■□□□□ 0.45
SSBP2-208ENST00000507655 GLT6D1Q7Z4J2 308 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 MARCH9Q86YJ5 346 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 BLOC1S5Q8TDH9 187 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 NAT6Q93015 286 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 PDLIM2Q96JY6 352 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 GSDMCQ9BYG8 508 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 KCNF1Q9H3M0 494 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 IL17CQ9P0M4 197 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 SIRPGQ9P1W8 387 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 PADI4Q9UM07 663 aa17.89■□□□□ 0.45
SSBP2-208ENST00000507655 CPED1A4D0V7 1026 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 OPA1O60313 960 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 NOBOXO60393 691 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 ASMTLO95671 621 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 ATP1A1P05023 1023 aaKnown RBP17.88■□□□□ 0.45
SSBP2-208ENST00000507655 PROS1P07225 676 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 JUPP14923 745 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 STIP1P31948 543 aaKnown RBP17.88■□□□□ 0.45
SSBP2-208ENST00000507655 ILF3Q12906 894 aaKnown RBP eCLIP17.88■□□□□ 0.45
SSBP2-208ENST00000507655 MSLNQ13421 630 aaPredicted RBP17.88■□□□□ 0.45
SSBP2-208ENST00000507655 ZNF569Q5MCW4 686 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 PERM1Q5SV97 790 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 CDCP2Q5VXM1 449 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 ZDHHC20Q5W0Z9 365 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 FAM46DQ8NEK8 389 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 DTX3LQ8TDB6 740 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 OR2M4Q96R27 311 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 SUDS3Q9H7L9 328 aaPredicted RBP17.88■□□□□ 0.45
SSBP2-208ENST00000507655 ARNT2Q9HBZ2 717 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 BPIFA1Q9NP55 256 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 GULP1Q9UBP9 304 aa17.88■□□□□ 0.45
SSBP2-208ENST00000507655 PCYT1BQ9Y5K3 369 aaPredicted RBP17.88■□□□□ 0.45
SSBP2-208ENST00000507655 PPFIA2O75334 1257 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 METTL18O95568 372 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 CAPNS1P04632 268 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 AK4P27144 223 aaPredicted RBP17.87■□□□□ 0.45
SSBP2-208ENST00000507655 CTBSQ01459 385 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 P3H1Q32P28 736 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 DENND5AQ6IQ26 1287 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 GALNT13Q8IUC8 556 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 REXO1L1PQ8IX06 675 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 DCBLD1Q8N8Z6 715 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 OR6C4Q8NGE1 309 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 C1orf54Q8WWF1 131 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 GLYATL1Q969I3 302 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 VPS35Q96QK1 796 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 TBL1YQ9BQ87 522 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 APOL2Q9BQE5 337 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 RMI1Q9H9A7 625 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 SPATS2LQ9NUQ6 558 aaKnown RBP17.87■□□□□ 0.45
SSBP2-208ENST00000507655 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.87■□□□□ 0.45
SSBP2-208ENST00000507655 TAAR2Q9P1P5 351 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 ATXN10Q9UBB4 475 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 CLCA2Q9UQC9 943 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 ACACAQ13085 2346 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 FREM2Q5SZK8 3169 aa17.87■□□□□ 0.45
SSBP2-208ENST00000507655 TMEM8BA6NDV4 472 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 NUAK1O60285 661 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 SLC25A14O95258 325 aaPredicted RBP17.86■□□□□ 0.45
SSBP2-208ENST00000507655 MT-CO3P00414 261 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 SPAM1P38567 509 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 TARDBPQ13148 414 aaKnown RBP eCLIP17.86■□□□□ 0.452e-6■■□□□ 12.3
SSBP2-208ENST00000507655 LRP8Q14114 963 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 HLTFQ14527 1009 aaKnown RBP eCLIP17.86■□□□□ 0.45
SSBP2-208ENST00000507655 TAF1AQ15573 450 aaPredicted RBP17.86■□□□□ 0.45
SSBP2-208ENST00000507655 C14orf28Q4W4Y0 310 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 MARK2Q7KZI7 788 aaKnown RBP17.86■□□□□ 0.45
SSBP2-208ENST00000507655 C17orf82Q86X59 251 aaPredicted RBP17.86■□□□□ 0.45
SSBP2-208ENST00000507655 SFTPA2Q8IWL1 248 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 KDF1Q8NAX2 398 aaPredicted RBP17.86■□□□□ 0.45
SSBP2-208ENST00000507655 MAPK15Q8TD08 544 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 DPEP2Q9H4A9 486 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 TRIM39Q9HCM9 518 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 IL26Q9NPH9 171 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 FEZ2Q9UHY8 353 aaPredicted RBP17.86■□□□□ 0.45
SSBP2-208ENST00000507655 TMPRSS11EQ9UL52 423 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 ZKSCAN5Q9Y2L8 839 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 PKP3Q9Y446 797 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 PLEKHM1Q9Y4G2 1056 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 GPSM3Q9Y4H4 160 aa17.86■□□□□ 0.45
SSBP2-208ENST00000507655 B4DGG1 531 aa17.85■□□□□ 0.45
SSBP2-208ENST00000507655 GPR89AB7ZAQ6 455 aa17.85■□□□□ 0.45
SSBP2-208ENST00000507655 USP12O75317 370 aa17.85■□□□□ 0.45
SSBP2-208ENST00000507655 GPR89BP0CG08 455 aa17.85■□□□□ 0.45
SSBP2-208ENST00000507655 PEX6Q13608 980 aa17.85■□□□□ 0.45
SSBP2-208ENST00000507655 SPARCL1Q14515 664 aa17.85■□□□□ 0.45
SSBP2-208ENST00000507655 CCNG2Q16589 344 aa17.85■□□□□ 0.45
SSBP2-208ENST00000507655 ATP13A5Q4VNC0 1218 aa17.85■□□□□ 0.45
SSBP2-208ENST00000507655 DRICH1Q6PGQ1 229 aaPredicted RBP17.85■□□□□ 0.45
SSBP2-208ENST00000507655 SLC30A9Q6PML9 568 aa17.85■□□□□ 0.45
SSBP2-208ENST00000507655 PHYKPLQ8IUZ5 450 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms