RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 DCBLD1Q8N8Z6 715 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 TP53I13Q8NBR0 393 aaPredicted RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 NETO2Q8NC67 525 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 ATL2Q8NHH9 583 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 NSMCE1Q8WV22 266 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 ZNF837Q96EG3 531 aaPredicted RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 POM121Q96HA1 1249 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 PBKQ96KB5 322 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 EXOC2Q96KP1 924 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 APOLD1Q96LR9 279 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 CSPG4P5Q96PW8 444 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 TSC22D3Q99576 134 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 NUP85Q9BW27 656 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 CINPQ9BW66 212 aaPredicted RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 FAM192AQ9GZU8 254 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 SUDS3Q9H7L9 328 aaPredicted RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 NHEJ1Q9H9Q4 299 aaPredicted RBP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 SP110Q9HB58 689 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 PCDH12Q9NPG4 1184 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.04□□□□□ -1.12
SCN1A-207ENST00000507401 KCTD5Q9NXV2 234 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 UVRAGQ9P2Y5 699 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 SPASTQ9UBP0 616 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 KLF15Q9UIH9 416 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 ANAPC7Q9UJX3 599 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 NENFQ9UMX5 172 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 CLCA2Q9UQC9 943 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 ITM2BQ9Y287 266 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 PKD1L2Q7Z442 2459 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 FREM2Q5SZK8 3169 aa8.04□□□□□ -1.12
SCN1A-207ENST00000507401 FAM149AA5PLN7 773 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 LMO7DNF2Z398 122 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 TRAFD1O14545 582 aaPredicted RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 AQP9O43315 295 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 LZTS3O60299 673 aaPredicted RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 MAFKO60675 156 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 SOCS5O75159 536 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 PPFIA2O75334 1257 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 PIGNO95427 931 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 THBS1P07996 1170 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 H2AFZP0C0S5 128 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 CR2P20023 1033 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 CES1P23141 567 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 HTR1BP28222 390 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 IGFALSP35858 605 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 MMP12P39900 470 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 RGRP47804 291 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 SCNN1BP51168 640 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 MRPS25P82663 173 aaKnown RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 GUCY1A3Q02108 690 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 SLC25A11Q02978 314 aaKnown RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 CYP4F3Q08477 520 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 SLC10A7Q0GE19 358 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 TARDBPQ13148 414 aaKnown RBP eCLIP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 PDK2Q15119 407 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 PPP1R7Q15435 360 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 SLC18A3Q16572 532 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 TSNAXIP1Q2TAA8 658 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 ASTE1Q2TB18 679 aaPredicted RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 WSCD2Q2TBF2 565 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 ODF2Q5BJF6 829 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 ZNF542PQ5EBM4 170 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 HES3Q5TGS1 186 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 MARC1Q5VT66 337 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 CDCP2Q5VXM1 449 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 ZNF385CQ66K41 422 aaPredicted RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 MACC1Q6ZN28 852 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 ARHGAP36Q6ZRI8 547 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 H2AFVQ71UI9 128 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 MAP7D3Q8IWC1 876 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 FSTL5Q8N475 847 aaPredicted RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 TEX26Q8N6G2 289 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 ZNF548Q8NEK5 533 aaPredicted RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 TPCN2Q8NHX9 752 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 HSPH1Q92598 858 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 GLMNQ92990 594 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 FATE1Q969F0 183 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 GRAMD1AQ96CP6 724 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 PGM2Q96G03 612 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 CAPZA3Q96KX2 299 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 NUDCD1Q96RS6 583 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 IL12RB2Q99665 862 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 LRRC1Q9BTT6 524 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 WRAP53Q9BUR4 548 aaKnown RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 SLC13A1Q9BZW2 595 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 PCDH18Q9HCL0 1135 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 MBNL1Q9NR56 388 aaKnown RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 PAPOLBQ9NRJ5 636 aaKnown RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 FAM114A2Q9NRY5 505 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 ZFATQ9P243 1243 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 CTTNBP2NLQ9P2B4 639 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 AMACRQ9UHK6 382 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 DMGDHQ9UI17 866 aaKnown RBP8.03□□□□□ -1.12
SCN1A-207ENST00000507401 ATP8A1Q9Y2Q0 1164 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 CFAP47Q6ZTR5 3102 aa8.03□□□□□ -1.12
SCN1A-207ENST00000507401 A0A087WV48 116 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 EME2A4GXA9 379 aaPredicted RBP8.02□□□□□ -1.13
SCN1A-207ENST00000507401 MUSKO15146 869 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 FFAR2O15552 330 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 HTRA2O43464 458 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms