RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 LMX1AQ8TE12 382 aa19.73■□□□□ 0.75
SNX25-204ENST00000506896 GRK7Q8WTQ7 553 aa19.73■□□□□ 0.75
SNX25-204ENST00000506896 PDXPQ96GD0 296 aa19.73■□□□□ 0.75
SNX25-204ENST00000506896 LRRC61Q9BV99 259 aa19.73■□□□□ 0.75
SNX25-204ENST00000506896 CAAP1Q9H8G2 361 aa19.73■□□□□ 0.75
SNX25-204ENST00000506896 SMARCAL1Q9NZC9 954 aa19.73■□□□□ 0.75
SNX25-204ENST00000506896 KMT2BQ9UMN6 2715 aaPredicted RBP19.73■□□□□ 0.75
SNX25-204ENST00000506896 FADS2P1A8MWK0 482 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 TPP1O14773 563 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 STX7O15400 261 aaKnown RBP19.72■□□□□ 0.75
SNX25-204ENST00000506896 LDOC1O95751 146 aaPredicted RBP19.72■□□□□ 0.75
SNX25-204ENST00000506896 CEACAM5P06731 702 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 IVLP07476 585 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 APRTP07741 180 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 GIMD1P0DJR0 217 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 ETF1P62495 437 aaKnown RBP19.72■□□□□ 0.75
SNX25-204ENST00000506896 CDH17Q12864 832 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 TTC27Q6P3X3 843 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 PRUNE1Q86TP1 453 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 OR1E3Q8WZA6 343 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 CNDP2Q96KP4 475 aaKnown RBP19.72■□□□□ 0.75
SNX25-204ENST00000506896 TCEAL2Q9H3H9 227 aaPredicted RBP19.72■□□□□ 0.75
SNX25-204ENST00000506896 CYP4F12Q9HCS2 524 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 BPIFA1Q9NP55 256 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 VPS18Q9P253 973 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 CNOT6Q9ULM6 557 aaKnown RBP19.72■□□□□ 0.75
SNX25-204ENST00000506896 USP24Q9UPU5 2620 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 ARL5AQ9Y689 179 aa19.72■□□□□ 0.75
SNX25-204ENST00000506896 LRP4O75096 1905 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 C1QTNF9BB2RNN3 333 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 LMO7DNF2Z398 122 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 AP3B1O00203 1094 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 INPP4BO15327 924 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 C1QTNF9P0C862 333 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 BASP1P80723 227 aaKnown RBP19.71■□□□□ 0.75
SNX25-204ENST00000506896 CDK16Q00536 496 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 LVRNQ6Q4G3 990 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 PPP1R21Q6ZMI0 780 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 TMPRSS7Q7RTY8 843 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 CREG2Q8IUH2 290 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 C17orf53Q8N3J3 647 aaPredicted RBP19.71■□□□□ 0.75
SNX25-204ENST00000506896 DNAAF3Q8N9W5 541 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 SCG3Q8WXD2 468 aaKnown RBP19.71■□□□□ 0.75
SNX25-204ENST00000506896 SCARF2Q96GP6 870 aaPredicted RBP19.71■□□□□ 0.75
SNX25-204ENST00000506896 VPS35Q96QK1 796 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 CARS2Q9HA77 564 aaKnown RBP19.71■□□□□ 0.75
SNX25-204ENST00000506896 IL26Q9NPH9 171 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 MRPL40Q9NQ50 206 aaKnown RBP19.71■□□□□ 0.75
SNX25-204ENST00000506896 NCKIPSDQ9NZQ3 722 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 MOSPD1Q9UJG1 213 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 SCN8AQ9UQD0 1980 aa19.71■□□□□ 0.75
SNX25-204ENST00000506896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.7■□□□□ 0.74
SNX25-204ENST00000506896 GLYATL1P3A0A0U1RQE8 302 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 GPR89AB7ZAQ6 455 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 FFAR2O15552 330 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 SLC25A14O95258 325 aaPredicted RBP19.7■□□□□ 0.74
SNX25-204ENST00000506896 PROS1P07225 676 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 ANXA6P08133 673 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 GPR89BP0CG08 455 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 HADHAP40939 763 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 PAFAH1B1P43034 410 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 LAMB3Q13751 1172 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 ITGA9Q13797 1035 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 ZCCHC8Q6NZY4 707 aaKnown RBP19.7■□□□□ 0.74
SNX25-204ENST00000506896 UNQ6494/PRO21346Q6UXR6 183 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 GKN2Q86XP6 184 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 PHYKPLQ8IUZ5 450 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 FAM181AQ8N9Y4 354 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 OR52K1Q8NGK4 314 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 GLYATL1Q969I3 302 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 CAPZA3Q96KX2 299 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 RMI1Q9H9A7 625 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 EVA1BQ9NVM1 165 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 TRNAU1APQ9NX07 287 aaKnown RBP19.7■□□□□ 0.74
SNX25-204ENST00000506896 APPL1Q9UKG1 709 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 SUFUQ9UMX1 484 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 DOLKQ9UPQ8 538 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 PCDHGA1Q9Y5H4 931 aa19.7■□□□□ 0.74
SNX25-204ENST00000506896 IGF2RP11717 2491 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 TRIM38O00635 465 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 SIGLEC6O43699 453 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 ASMTLO95671 621 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 KRT14P02533 472 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 CASQ1P31415 396 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 ZNF140P52738 457 aaPredicted RBP19.69■□□□□ 0.74
SNX25-204ENST00000506896 DNAJC3Q13217 504 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 C1orf61Q13536 156 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 PROX2Q3B8N5 592 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 DOK6Q6PKX4 331 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 CCNI2Q6ZMN8 369 aaPredicted RBP19.69■□□□□ 0.74
SNX25-204ENST00000506896 TRIM74Q86UV6 250 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 OR4K2Q8NGD2 314 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 TRIM44Q96DX7 344 aaPredicted RBP19.69■□□□□ 0.74
SNX25-204ENST00000506896 RUNDC3BQ96NL0 473 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 CLPBQ9H078 707 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 TRIM39Q9HCM9 518 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 CASS4Q9NQ75 786 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 CACNA1BQ00975 2339 aa19.69■□□□□ 0.74
SNX25-204ENST00000506896 LDB2O43679 373 aa19.68■□□□□ 0.74
SNX25-204ENST00000506896 BUD23O43709 281 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms