RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 DUSP19Q8WTR2 217 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 IGSF8Q969P0 613 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 VPS33AQ96AX1 596 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 EME1Q96AY2 570 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 RMDN1Q96DB5 314 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 VMP1Q96GC9 406 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 ZFYVE19Q96K21 471 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 NUDCD1Q96RS6 583 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 GAD1Q99259 594 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 GRPEL1Q9HAV7 217 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 THSD1Q9NS62 852 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 ARGLU1Q9NWB6 273 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 KLHL13Q9P2N7 655 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 AMACRQ9UHK6 382 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 ANAPC2Q9UJX6 822 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 NFE2L3Q9Y4A8 694 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 HS3ST3A1Q9Y663 406 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 BCL9LQ86UU0 1499 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 CCDC144AA2RUR9 1427 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 PRAG1Q86YV5 1406 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 EP400Q96L91 3159 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 GLI3P10071 1580 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 A0A1B0GVM2 712 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 TCRBV21S2A2A0A5A6 115 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 C1orf226A1L170 272 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 H3BQ06 376 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 CLGNO14967 610 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 FZD7O75084 574 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZC3H11AO75152 810 aaKnown RBP eCLIP3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 C1QL1O75973 258 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 CLDN7O95471 211 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 CCDC175P0C221 793 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 MMP9P14780 707 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 CD58P19256 250 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 MYF6P23409 242 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 ACADLP28330 430 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 DCTDP32321 178 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 THPOP40225 353 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 MATR3P43243 847 aaKnown RBP eCLIP3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 MSH2P43246 934 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 ELLP55199 621 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 TMPRSS3P57727 454 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 MRPS34P82930 218 aaKnown RBP3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 ID2Q02363 134 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 TFCP2Q12800 502 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 FOXF2Q12947 444 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 ALCAMQ13740 583 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 SNTB1Q13884 538 aaKnown RBP3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 SCARB2Q14108 478 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 C2orf68Q2NKX9 166 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZNF628Q5EBL2 1059 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 RARS2Q5T160 578 aaKnown RBP3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 DAB2IPQ5VWQ8 1189 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 SIGIRRQ6IA17 410 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 TMEM71Q6P5X7 295 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 PLPPR4Q7Z2D5 763 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 DEFB132Q7Z7B7 95 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 TSPAN33Q86UF1 283 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 SFTPA2Q8IWL1 248 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 SCYL3Q8IZE3 742 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 GALNT16Q8N428 558 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 TEX45Q8NA69 505 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 SCCPDHQ8NBX0 429 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 OR6J1Q8NGC5 347 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 BICD2Q8TD16 824 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 HASPINQ8TF76 798 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 SLC35F5Q8WV83 523 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZNF622Q969S3 477 aaKnown RBP eCLIP3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 TMEM18Q96B42 140 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 PTERQ96BW5 349 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 DGAT2Q96PD7 388 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 SIGLEC11Q96RL6 698 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 PCGF1Q9BSM1 259 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 NPFFR1Q9GZQ6 430 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 DENND2DQ9H6A0 471 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 TASP1Q9H6P5 420 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 GPR108Q9NPR9 543 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 DDX4Q9NQI0 724 aaKnown RBP3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 PDGFCQ9NRA1 345 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 CYSLTR2Q9NS75 346 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 DECR2Q9NUI1 292 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 C5AR2Q9P296 337 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 WDR35Q9P2L0 1181 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZNF112Q9UJU3 913 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 FBXW11Q9UKB1 542 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 PLAGL1Q9UM63 463 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 RALGAPBQ86X10 1494 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 PIK3C2GO75747 1445 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 SPATA31E1Q6ZUB1 1445 aa3.27□□□□□ -1.89
TRAPPC11-205ENST00000506426 LRPPRCP42704 1394 aaKnown RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 COL22A1Q8NFW1 1626 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 SOS1Q07889 1333 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 NPHP3Q7Z494 1330 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 LOC102723996A0A087X1L8 192 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 GPR75-ASB3A0A0A6YYF3 556 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 TRBC2A0A5B9 178 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 GAGE12JA6NER3 117 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 LRRC3CA6NJW4 275 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 IPO8O15397 1037 aaKnown RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PSMD10O75832 226 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms