RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 UBXN7O94888 489 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 ALPPP05187 535 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 AMD1P17707 334 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 SERPINA4P29622 427 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 ETV3P41162 512 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 GCNT1Q02742 428 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 GPS2Q13227 327 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 KCNAB1Q14722 419 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 IZUMO3Q5VZ72 239 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 CYB5D1Q6P9G0 228 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 FAM92BQ6ZTR7 304 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 C1orf131Q8NDD1 294 aaKnown RBP12.37□□□□□ -0.43
LSM6-204ENST00000504181 ZNF397Q8NF99 534 aaPredicted RBP12.37□□□□□ -0.43
LSM6-204ENST00000504181 LMO3Q8TAP4 145 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 CCDC47Q96A33 483 aaKnown RBP12.37□□□□□ -0.43
LSM6-204ENST00000504181 C14orf79Q96F83 325 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 CHST8Q9H2A9 424 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 SYNCQ9H7C4 482 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 MCCC2Q9HCC0 563 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 CPNE7Q9UBL6 633 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 B4GALT6Q9UBX8 382 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 TCFL5Q9UL49 500 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 NOVA2Q9UNW9 492 aaKnown RBP12.37□□□□□ -0.43
LSM6-204ENST00000504181 CNTN6Q9UQ52 1028 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 PCDHGB6Q9Y5F9 930 aa12.37□□□□□ -0.43
LSM6-204ENST00000504181 NBEAL1Q6ZS30 2694 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 CSPG4Q6UVK1 2322 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 FAM72CH0Y354 149 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 SLC16A3O15427 465 aaKnown RBP12.36□□□□□ -0.43
LSM6-204ENST00000504181 YEATS4O95619 227 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 FOLR1P15328 257 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 NELFEP18615 380 aaKnown RBP12.36□□□□□ -0.43
LSM6-204ENST00000504181 KCNK10P57789 538 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
LSM6-204ENST00000504181 LRP8Q14114 963 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 MYBPC3Q14896 1274 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 CNGA3Q16281 694 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 SLC25A52Q3SY17 297 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 PTPN20Q4JDL3 420 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 FAM72AQ5TYM5 149 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 MANEALQ5VSG8 457 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 LCN10Q6JVE6 187 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 FAM72DQ6L9T8 149 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 CHST15Q7LFX5 561 aaPredicted RBP12.36□□□□□ -0.43
LSM6-204ENST00000504181 PRSS42Q7Z5A4 293 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 FAM72BQ86X60 149 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 CEP97Q8IW35 865 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 SMYD4Q8IYR2 804 aaPredicted RBP12.36□□□□□ -0.43
LSM6-204ENST00000504181 SIDT2Q8NBJ9 832 aaKnown RBP12.36□□□□□ -0.43
LSM6-204ENST00000504181 KLHL6Q8WZ60 621 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 TM9SF4Q92544 642 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 DTD2Q96FN9 168 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 TUBGCP5Q96RT8 1024 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 MAGEB5Q9BZ81 275 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 NOL6Q9H6R4 1146 aaKnown RBP12.36□□□□□ -0.43
LSM6-204ENST00000504181 ZNF552Q9H707 407 aaPredicted RBP12.36□□□□□ -0.43
LSM6-204ENST00000504181 ATP13A3Q9H7F0 1226 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 WASH6PQ9NQA3 447 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 OR12D3Q9UGF7 316 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 ARMCX3Q9UH62 379 aaPredicted RBP12.36□□□□□ -0.43
LSM6-204ENST00000504181 NEU3Q9UQ49 428 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 MTMR6Q9Y217 621 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 KCNK6Q9Y257 313 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 PRKAB1Q9Y478 270 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 PCYT1BQ9Y5K3 369 aaPredicted RBP12.36□□□□□ -0.43
LSM6-204ENST00000504181 SLC30A1Q9Y6M5 507 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 JMJD1CQ15652 2540 aa12.36□□□□□ -0.43
LSM6-204ENST00000504181 ABCA4P78363 2273 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 COL6A5A8TX70 2615 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 CPNE3O75131 537 aaKnown RBP12.35□□□□□ -0.43
LSM6-204ENST00000504181 JRKO75564 520 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 KLK2P20151 261 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 GPR1P46091 355 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 RGRP47804 291 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 HIF1AQ16665 826 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 ZNF765Q7L2R6 523 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 TGIF2LYQ8IUE0 185 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 GALNT16Q8N428 558 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 RSC1A1Q92681 617 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 ECHDC3Q96DC8 303 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 FCRL4Q96PJ5 515 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 HERPUD2Q9BSE4 406 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 MLPHQ9BV36 600 aaPredicted RBP12.35□□□□□ -0.43
LSM6-204ENST00000504181 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
LSM6-204ENST00000504181 UBA2Q9UBT2 640 aaPredicted RBP12.35□□□□□ -0.43
LSM6-204ENST00000504181 ZNHIT2Q9UHR6 403 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 PCDHA7Q9UN72 937 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 HCFC1P51610 2035 aa12.35□□□□□ -0.43
LSM6-204ENST00000504181 TRGV8A0A0C4DH27 118 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 KIR2DS5A0A0G2JLQ3 304 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 A0A0G2JNG1 304 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 A0A1W2PQJ5 194 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 FAM170AA1A519 330 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 FAM221AA4D161 298 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 KIR2DS3K7RE56 304 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 CCL21O00585 134 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 SCRG1O75711 98 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 EBLN1P0CF75 366 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 F3P13726 295 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 SLC2A4P14672 509 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms