RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TFCP2L1Q9NZI6 479 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CPNE7Q9UBL6 633 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 GRHPRQ9UBQ7 328 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 NPIPA1Q9UND3 350 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 V9GY48 417 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ABCC11Q96J66 1382 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 C2orf92A0A1B0GVN3 265 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 FAM83GA6ND36 823 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF891A8MT65 544 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 PLIN3O60664 434 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 BCAS2O75934 225 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CAMTA2O94983 1202 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SEC24AO95486 1093 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 IFNA21P01568 189 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 APOC3P02656 99 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 DDCP20711 480 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CAPN3P20807 821 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CHMP24386 653 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 PHKA2P46019 1235 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 STXBP1P61764 594 aaKnown RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 MMRN1Q13201 1228 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 MTMR1Q13613 665 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 QPRTQ15274 297 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 FNBP1LQ5T0N5 605 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 TTI2Q6NXR4 508 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SEZ6L2Q6UXD5 910 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SIMC1Q8NDZ2 872 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 GAB3Q8WWW8 586 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 OIT3Q8WWZ8 545 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF668Q96K58 619 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 OR2M4Q96R27 311 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF222Q9UK12 451 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 GOLT1BQ9Y3E0 138 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CACNG2Q9Y698 323 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 A0A1B0GV72 72 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CIB4A0PJX0 185 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 J3QRK9 145 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 NKRFO15226 690 aaKnown RBP eCLIP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 PRODHO43272 600 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 TBX1O43435 398 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SOCS5O75159 536 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 KRT33AO76009 404 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CALCBP10092 127 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 TUBP50607 506 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CDH6P55285 790 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SPCS3P61009 180 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 RBL2Q08999 1139 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SLC10A7Q0GE19 358 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 DPYDQ12882 1025 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ANKRD39Q53RE8 183 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 YIF1BQ5BJH7 314 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 OR7E24Q6IFN5 339 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF783Q6ZMS7 281 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CYFIP1Q7L576 1253 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SKA3Q8IX90 412 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF507Q8TCN5 953 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 GLG1Q92896 1179 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 FBXL8Q96CD0 374 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SHDQ96IW2 340 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 C10orf90Q96M02 699 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 STRBPQ96SI9 672 aaKnown RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ISCA1Q9BUE6 129 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 OR51B6Q9H340 312 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 TRPC4Q9UBN4 977 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZMYM5Q9UJ78 669 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 FARSAQ9Y285 508 aaKnown RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF536O15090 1300 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZBTB7BO15156 539 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 YY2O15391 372 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SCO1O75880 301 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 RPS6KB1P23443 525 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 NPTX1Q15818 432 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 DENND5AQ6IQ26 1287 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 VHLLQ6RSH7 139 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ADPRHL1Q8NDY3 354 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CYGBQ8WWM9 190 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 MFSD3Q96ES6 412 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 FAM84BQ96KN1 310 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 QRFPRQ96P65 431 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CEP41Q9BYV8 373 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 AGO2Q9UKV8 859 aaKnown RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 PCOLCE2Q9UKZ9 415 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 A0A1B0GTQ1 180 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 A0A1B0GW15 77 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 E7EWF7 191 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 COPEO14579 308 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ZNF208O43345 1280 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SYN1P17600 705 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ITIH2P19823 946 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 PPP2R1BP30154 601 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 DHPSP49366 369 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 ALDH3A2P51648 485 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 KCNQ4P56696 695 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 FMR1Q06787 632 aaKnown RBP eCLIP6.23□□□□□ -1.417e-6■■□□□ 12.8
CLCN3-204ENST00000504131 CHRNDQ07001 517 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 DNASE1L3Q13609 305 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 DLG2Q15700 870 aa6.23□□□□□ -1.41
CLCN3-204ENST00000504131 MEX3BQ6ZN04 569 aaKnown RBP6.23□□□□□ -1.41
CLCN3-204ENST00000504131 SLC22A16Q86VW1 577 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms