RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SELENOMQ8WWX9 145 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 CITED4Q96RK1 184 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 MFSD1Q9H3U5 465 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 ZFP14Q9HCL3 533 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 ACTR3BQ9P1U1 418 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 TCAF1Q9Y4C2 921 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 RGPD2P0DJD1 1756 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 GLTPD2A6NH11 291 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 YAP1P46937 504 aaKnown RBP17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 GPR158Q5T848 1215 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 GALNT5Q7Z7M9 940 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 ERLEC1Q96DZ1 483 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 TUBA1CQ9BQE3 449 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 BTBD19C9JJ37 291 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 HAT1O14929 419 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 ARPC2O15144 300 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 ITGA2P17301 1181 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 DGKAP23743 735 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 L1CAMP32004 1257 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 STT3AP46977 705 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 TTPAP49638 278 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 MED22Q15528 200 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 PLET1Q6UQ28 207 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 EIF3MQ7L2H7 374 aaKnown RBP17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 GPR180Q86V85 440 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 ARMC8Q8IUR7 673 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 TMEM199Q8N511 208 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 AP3S1Q92572 193 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 SYT11Q9BT88 431 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 GMIPQ9P107 970 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 SSR3Q9UNL2 185 aa17.15■□□□□ 0.34
HMGXB3-201ENST00000502717 MYOCOSA0A1B0GUC4 107 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 TBX1O43435 398 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 NBNO60934 754 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 SNNO75324 88 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 GSTM1P09488 218 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 COX7A2P14406 83 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 ITGB6P18564 788 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 KPNA1P52294 538 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 HNRNPDQ14103 355 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 ADAMTSL2Q86TH1 951 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 KIAA0319LQ8IZA0 1049 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 KANSL3Q9P2N6 904 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 NENFQ9UMX5 172 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 PIGRP01833 764 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 C8BP07358 591 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 RHOCP08134 193 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 PROZP22891 400 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 CSNK2BP67870 215 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 ALDH6A1Q02252 535 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 CRY1Q16526 586 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 C6orf183Q5T699 404 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 TMEM53Q6P2H8 277 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 OTOP3Q7RTS5 596 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 C11orf74Q86VG3 221 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 SMG8Q8ND04 991 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 RASSF1Q9NS23 344 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 COL20A1Q9P218 1284 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 POLR3HQ9Y535 204 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 PSMD11O00231 422 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 CA12O43570 354 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 BUD23O43709 281 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 TSPAN3O60637 253 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 PAN2Q504Q3 1202 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 FGD3Q5JSP0 725 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 FCGR1BQ92637 280 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 TMCO6Q96DC7 493 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 SNX6Q9UNH7 406 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 COL1A1P02452 1464 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 C9JVG2 144 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 PIP5K1BO14986 540 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 RNASEH2AO75792 299 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 PRKAR1AP10644 381 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 EPB42P16452 691 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 HSDL1Q3SXM5 330 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 SH3BP5LQ7L8J4 393 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 LRRC17Q8N6Y2 441 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 OR4L1Q8NH43 312 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 ZUFSPQ96AP4 578 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 VPS35Q96QK1 796 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 FBXO44Q9H4M3 255 aa17.14■□□□□ 0.33
HMGXB3-201ENST00000502717 TOP3BO95985 862 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 EGFRP00533 1210 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 TFPTP0C1Z6 253 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 CDH1P12830 882 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 CLCQ05315 142 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 ACSM2AQ08AH3 577 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 TGFBIQ15582 683 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 ACSM2BQ68CK6 577 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 ZCCHC8Q6NZY4 707 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 DERAQ9Y315 318 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 H3BMM5 538 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 PABPC1P11940 636 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 ZNF182P17025 639 aaPredicted RBP17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 GRM5P41594 1212 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 ETV4P43268 484 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 NFE2Q16621 373 aaPredicted RBP17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 CELF3Q5SZQ8 465 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 CAND1Q86VP6 1230 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms