RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 RBM44Q6ZP01 1051 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 FAM43BQ6ZT52 329 aaPredicted RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 RFX8Q6ZV50 586 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 ARMC10Q8N2F6 343 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 BBS5Q8N3I7 341 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 DCLK2Q8N568 766 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SLC25A41Q8N5S1 370 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 LZTR1Q8N653 840 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 ZNF781Q8N8C0 355 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 KYQ8NBH2 561 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 COLGALT1Q8NBJ5 622 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 UBA3Q8TBC4 463 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SLC26A7Q8TE54 656 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 PPP4R1Q8TF05 950 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SLCO4A1Q96BD0 722 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 CERS2Q96G23 380 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 TRMT2BQ96GJ1 504 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 HSFY1Q96LI6 401 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 RILPQ96NA2 401 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 SLC2A13Q96QE2 648 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 OR52B2Q96RD2 323 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 RANBP9Q96S59 729 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 GPR22Q99680 433 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 PKP2Q99959 881 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 MINDY3Q9H8M7 445 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 ZBTB26Q9HCK0 441 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 MRGBPQ9NV56 204 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 MSRAQ9UJ68 235 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 PTBP2Q9UKA9 531 aaKnown RBP3.94□□□□□ -1.78
CLTC-209ENST00000498711 SRPK3Q9UPE1 567 aa3.94□□□□□ -1.78
CLTC-209ENST00000498711 CCL15-CCL14A0A0B4J2E2 113 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 A0A0J9YVX5 310 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 CCDC195A0A1B0GUA6 201 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 DYTNA2CJ06 578 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 CAPN8A6NHC0 703 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 KPNA7A9QM74 516 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 H3BNH8 94 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 TRIM38O00635 465 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 HDAC3O15379 428 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 B4GALT5O43286 388 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 HBP1O60381 514 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 DAB1O75553 588 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 PDE5AO76074 875 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 AP2A1O95782 977 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 APRTP07741 180 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 FAM58BPP0C7Q3 252 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 CXCL8P10145 99 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 KITP10721 976 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 CD19P15391 556 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 CDH2P19022 906 aaPredicted RBP3.93□□□□□ -1.78
CLTC-209ENST00000498711 CYP2B6P20813 491 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 MGAT1P26572 445 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 SDC4P31431 198 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 TCF7P36402 384 aaPredicted RBP3.93□□□□□ -1.78
CLTC-209ENST00000498711 ACADSBP45954 432 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 RPL14P50914 215 aaKnown RBP3.93□□□□□ -1.78
CLTC-209ENST00000498711 SP3Q02447 781 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 PRKAA1Q13131 559 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 ITGA7Q13683 1181 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 TRIP10Q15642 601 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 CCL15Q16663 113 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 GOLGA7BQ2TAP0 167 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 LSM12Q3MHD2 195 aaKnown RBP3.93□□□□□ -1.78
CLTC-209ENST00000498711 CYP27C1Q4G0S4 372 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 HSP90AA5PQ58FG0 334 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 CPZQ66K79 652 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 BEND4Q6ZU67 534 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 CCDC149Q6ZUS6 474 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 CEP68Q76N32 757 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 GALNT7Q86SF2 657 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 COLGALT2Q8IYK4 626 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 NLGN4XQ8N0W4 816 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 CAMKK1Q8N5S9 505 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 PACRGLQ8N7B6 248 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 LRRC52Q8N7C0 313 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 POU5F2Q8N7G0 328 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 ANKRD52Q8NB46 1076 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 KDM1BQ8NB78 822 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 RNF149Q8NC42 400 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 FAM156AQ8NDB6 213 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 HMGCLL1Q8TB92 370 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.93□□□□□ -1.78
CLTC-209ENST00000498711 BRI3BPQ8WY22 251 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 ATP2A3Q93084 1043 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 NTAN1Q96AB6 310 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 ZUFSPQ96AP4 578 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 PGAP3Q96FM1 320 aaPredicted RBP3.93□□□□□ -1.78
CLTC-209ENST00000498711 HPDLQ96IR7 371 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 HIC2Q96JB3 615 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 MPP4Q96JB8 637 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 CATSPER2Q96P56 530 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 NPY6RQ99463 290 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 KIFC1Q9BW19 673 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 QRSL1Q9H0R6 528 aaKnown RBP3.93□□□□□ -1.78
CLTC-209ENST00000498711 LRRC40Q9H9A6 602 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 MRPL40Q9NQ50 206 aaKnown RBP3.93□□□□□ -1.78
CLTC-209ENST00000498711 OLAHQ9NV23 265 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 ARMC1Q9NVT9 282 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 GPATCH2LQ9NWQ4 482 aa3.93□□□□□ -1.78
CLTC-209ENST00000498711 SYBUQ9NX95 663 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms