RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 HS3ST3A1Q9Y663 406 aa5.57□□□□□ -1.52
SPTA1-209ENST00000498708 RNF215Q9Y6U7 377 aa5.57□□□□□ -1.52
SPTA1-209ENST00000498708 U3KQE9 123 aa5.57□□□□□ -1.52
SPTA1-209ENST00000498708 PKDREJQ9NTG1 2253 aa5.57□□□□□ -1.52
SPTA1-209ENST00000498708 C16orf96A6NNT2 1141 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 MKRN2OSH3BPM6 223 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 PES1O00541 588 aaKnown RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 ZMPSTE24O75844 475 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 SORBS2O94875 1100 aaKnown RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 CBX6O95503 412 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 NADKO95544 446 aaPredicted RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 FGFR1OPO95684 399 aaKnown RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 CD160O95971 181 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 ANXA6P08133 673 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 CTSEP14091 401 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 TSHRP16473 764 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 PON1P27169 355 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 IGFALSP35858 605 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 CD96P40200 585 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 RABIFP47224 123 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 SERPINH1P50454 418 aaKnown RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 GNA12Q03113 381 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 MEA1Q16626 185 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 TPD52L1Q16890 204 aaPredicted RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 C15orf59Q2T9L4 293 aaPredicted RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 BRMS1LQ5PSV4 323 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 KIAA1161Q6NSJ0 714 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 TRNP1Q6NT89 227 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 ENOSF1Q7L5Y1 443 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 SLC26A9Q7LBE3 791 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 SETD3Q86TU7 594 aaPredicted RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 TTC7BQ86TV6 843 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 DCP2Q8IU60 420 aaKnown RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 HID1Q8IV36 788 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 PCDH20Q8N6Y1 951 aaKnown RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 Q8N9G6 341 aaPredicted RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 KYQ8NBH2 561 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 ZNF397Q8NF99 534 aaPredicted RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 CXorf40AQ8TE69 158 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 CPA5Q8WXQ8 436 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 SHC3Q92529 594 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 TSACCQ96A04 125 aaPredicted RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 C18orf8Q96DM3 657 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 C19orf60Q96EN9 201 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 KLF6Q99612 283 aaPredicted RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 SLC38A3Q99624 504 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 CMKLR1Q99788 373 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 WRAP53Q9BUR4 548 aaKnown RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 ZYG11BQ9C0D3 744 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 SUDS3Q9H7L9 328 aaPredicted RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 YY1AP1Q9H869 796 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 SIX2Q9NPC8 291 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 MBNL1Q9NR56 388 aaKnown RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 METTL5Q9NRN9 209 aaKnown RBP5.56□□□□□ -1.52
SPTA1-209ENST00000498708 FAM53CQ9NYF3 392 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 SPASTQ9UBP0 616 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 TLK1Q9UKI8 766 aa5.56□□□□□ -1.52
SPTA1-209ENST00000498708 ACANP16112 2415 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 ILVBLA1L0T0 632 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 DBX1A6NMT0 343 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 HMGB1P1B2RPK0 211 aaPredicted RBP5.55□□□□□ -1.52
SPTA1-209ENST00000498708 LMO7DNF2Z398 122 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 FAM72CH0Y354 149 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 INSIG1O15503 277 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 TSPAN6O43657 245 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 BUB1O43683 1085 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 KRT86O43790 486 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 RAD1O60671 282 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 F9P00740 461 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 MMEP08473 750 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 FGF3P11487 239 aaPredicted RBP5.55□□□□□ -1.52
SPTA1-209ENST00000498708 XPAP23025 273 aaPredicted RBP5.55□□□□□ -1.52
SPTA1-209ENST00000498708 CALRP27797 417 aaKnown RBP5.55□□□□□ -1.52
SPTA1-209ENST00000498708 EIF4A3P38919 411 aaKnown RBP5.55□□□□□ -1.52
SPTA1-209ENST00000498708 CLCN7P51798 805 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 SNX16P57768 344 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 KRTAP10-9P60411 292 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 PFN3P60673 137 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 PPARDQ03181 441 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 IKZF1Q13422 519 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 PTK2BQ14289 1009 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 KLHL40Q2TBA0 621 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 SLC25A52Q3SY17 297 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 PHF19Q5T6S3 580 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 FAM72AQ5TYM5 149 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 NAA35Q5VZE5 725 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 ALG1LQ6GMV1 187 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 FAM72DQ6L9T8 149 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 ESRP1Q6NXG1 681 aaKnown RBP5.55□□□□□ -1.52
SPTA1-209ENST00000498708 ENPP7Q6UWV6 458 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 FAM214BQ7L5A3 538 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 NOP9Q86U38 636 aaKnown RBP5.55□□□□□ -1.52
SPTA1-209ENST00000498708 TMEM135Q86UB9 458 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 FAM72BQ86X60 149 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 SLITRK4Q8IW52 837 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 SFTPA2Q8IWL1 248 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 Q8NA96 180 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 TMEM35BQ8NCS4 154 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 RCBTB1Q8NDN9 531 aa5.55□□□□□ -1.52
SPTA1-209ENST00000498708 JOSD2Q8TAC2 188 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms