RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 CEBPZQ03701 1054 aaKnown RBP5.49□□□□□ -1.53
SF3B1-212ENST00000496458 GRIK2Q13002 908 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 GTF2H2Q13888 395 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 ZNF234Q14588 700 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 CDONQ4KMG0 1287 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 INTS11Q5TA45 600 aaKnown RBP5.49□□□□□ -1.53
SF3B1-212ENST00000496458 TTI2Q6NXR4 508 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 GTF2H2CQ6P1K8 395 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 MMS22LQ6ZRQ5 1243 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 SLC26A9Q7LBE3 791 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 GPR180Q86V85 440 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 NRROSQ86YC3 692 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 SLC38A5Q8WUX1 472 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 TAAR8Q969N4 342 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 FAM149B1Q96BN6 582 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 ZNF583Q96ND8 569 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 TRMT61BQ9BVS5 477 aaKnown RBP5.49□□□□□ -1.53
SF3B1-212ENST00000496458 LTB4R2Q9NPC1 389 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 CNOT8Q9UFF9 292 aaKnown RBP5.49□□□□□ -1.53
SF3B1-212ENST00000496458 MAU2Q9Y6X3 613 aa5.49□□□□□ -1.53
SF3B1-212ENST00000496458 KAT6BQ8WYB5 2073 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 A0A1W2PRG0 241 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 C1orf226A1L170 272 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 G3BP1Q13283 466 aaKnown RBP eCLIP5.48□□□□□ -1.53
SF3B1-212ENST00000496458 TBCEQ15813 527 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-212ENST00000496458 DECR1Q16698 335 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 ALFQ53S48 1182 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 C19orf48Q6RUI8 117 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 GSG1LQ6UXU4 331 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 KCTD8Q6ZWB6 473 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 MARK2Q7KZI7 788 aaKnown RBP5.48□□□□□ -1.53
SF3B1-212ENST00000496458 TMPRSS12Q86WS5 348 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 DIS3L2Q8IYB7 885 aaKnown RBP5.48□□□□□ -1.53
SF3B1-212ENST00000496458 METTL27Q8N6F8 245 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-212ENST00000496458 ZBTB8BQ8NAP8 495 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-212ENST00000496458 TMEM116Q8NCL8 245 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 ZNF334Q9HCZ1 680 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-212ENST00000496458 FBXL2Q9UKC9 423 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 ACSL5Q9ULC5 683 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 DLGAP4Q9Y2H0 992 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 TMEM98Q9Y2Y6 226 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 LAS1LQ9Y4W2 734 aaKnown RBP5.48□□□□□ -1.53
SF3B1-212ENST00000496458 UNC13AQ9UPW8 1703 aa5.48□□□□□ -1.53
SF3B1-212ENST00000496458 M0QZ24 198 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 DVL1O14640 695 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 HS3ST1O14792 307 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 POLR2CP19387 275 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-212ENST00000496458 UBA1P22314 1058 aaKnown RBP5.47□□□□□ -1.53
SF3B1-212ENST00000496458 DVL1P1P54792 670 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-212ENST00000496458 CLDN20P56880 219 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-212ENST00000496458 MAD2L1Q13257 205 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-212ENST00000496458 DMP1Q13316 513 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-212ENST00000496458 TSTQ16762 297 aaKnown RBP5.47□□□□□ -1.53
SF3B1-212ENST00000496458 TMEM35AQ53FP2 167 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 RAD9BQ6WBX8 426 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 NFE4Q86UQ8 179 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 PCYOX1LQ8NBM8 494 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 NAXEQ8NCW5 288 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 SLC24A4Q8NFF2 622 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 ETNPPLQ8TBG4 499 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 PERPQ96FX8 193 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 POLR3CQ9BUI4 534 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-212ENST00000496458 SLC26A6Q9BXS9 759 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 ERRFI1Q9UJM3 462 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-212ENST00000496458 PNMA2Q9UL42 364 aa5.47□□□□□ -1.53
SF3B1-212ENST00000496458 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 A0A1W2PQF6 199 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 ZNHIT1O43257 154 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 RTN3O95197 1032 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-212ENST00000496458 MLYCDO95822 493 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 UBA7P41226 1012 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 APOBEC1P41238 236 aaKnown RBP5.46□□□□□ -1.54
SF3B1-212ENST00000496458 AMPHP49418 695 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 EEF1A1P68104 462 aaKnown RBP5.46□□□□□ -1.54
SF3B1-212ENST00000496458 CSTF3Q12996 717 aaKnown RBP5.46□□□□□ -1.54
SF3B1-212ENST00000496458 PDSS1Q5T2R2 415 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 EEF1A1P5Q5VTE0 462 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 C18orf63Q68DL7 685 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 OR7E24Q6IFN5 339 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 CLEC4GQ6UXB4 293 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 ZNF852Q6ZMS4 543 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 THAP6Q8TBB0 222 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 SLC44A1Q8WWI5 657 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 RFFLQ8WZ73 363 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 ARHGEF26Q96DR7 871 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 ALG14Q96F25 216 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 PPM1MQ96MI6 270 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 PGLYRP2Q96PD5 576 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 MAP7D2Q96T17 732 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 LRRC1Q9BTT6 524 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 FKRPQ9H9S5 495 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 RANGRFQ9HD47 186 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-212ENST00000496458 OR14J1Q9UGF5 321 aa5.46□□□□□ -1.54
SF3B1-212ENST00000496458 LIMA1Q9UHB6 759 aaKnown RBP5.46□□□□□ -1.54
SF3B1-212ENST00000496458 FAF1Q9UNN5 650 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-212ENST00000496458 CCDC189A1A4V9 331 aa5.45□□□□□ -1.54
SF3B1-212ENST00000496458 GAS8-AS1O95177 125 aa5.45□□□□□ -1.54
SF3B1-212ENST00000496458 IPO7O95373 1038 aaKnown RBP5.45□□□□□ -1.54
SF3B1-212ENST00000496458 CD53P19397 219 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms