RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 C2orf81A6NN90 581 aa13.72□□□□□ -0.21
VCP-207ENST00000493886 TEX28O15482 410 aa13.72□□□□□ -0.21
VCP-207ENST00000493886 SPATA31D3P0C874 917 aa13.72□□□□□ -0.21
VCP-207ENST00000493886 KCNC1P48547 511 aa13.72□□□□□ -0.21
VCP-207ENST00000493886 SUOXP51687 545 aa13.72□□□□□ -0.21
VCP-207ENST00000493886 FLOT2Q14254 428 aa13.72□□□□□ -0.21
VCP-207ENST00000493886 GK3PQ14409 553 aa13.72□□□□□ -0.21
VCP-207ENST00000493886 SPATA31D4Q6ZUB0 917 aa13.72□□□□□ -0.21
VCP-207ENST00000493886 DSELQ8IZU8 1212 aa13.72□□□□□ -0.21
VCP-207ENST00000493886 HJURPQ8NCD3 748 aaPredicted RBP13.72□□□□□ -0.21
VCP-207ENST00000493886 ICA1LQ8NDH6 482 aa13.72□□□□□ -0.21
VCP-207ENST00000493886 COPS7BQ9H9Q2 264 aaPredicted RBP13.72□□□□□ -0.21
VCP-207ENST00000493886 INTS10Q9NVR2 710 aaKnown RBP13.72□□□□□ -0.21
VCP-207ENST00000493886 ANKRD36A6QL64 1941 aa13.72□□□□□ -0.21
VCP-207ENST00000493886 GREM1O60565 184 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 CD1DP15813 335 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 HDCP19113 662 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 WDR5P61964 334 aaKnown RBP13.71□□□□□ -0.21
VCP-207ENST00000493886 ZXDBP98169 803 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 FOLH1Q04609 750 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 SULT2A1Q06520 285 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 TMED1Q13445 227 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 ITIH5Q86UX2 942 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 KBTBD6Q86V97 674 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 PTERQ96BW5 349 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 NPAS2Q99743 824 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 FEM1AQ9BSK4 669 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 ZBED2Q9BTP6 218 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 SPATA16Q9BXB7 569 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 ADGRE3Q9BY15 652 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 VPS28Q9UK41 221 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 CPQQ9Y646 472 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 C15orf38-AP3S2A0A0A6YYH1 394 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 UBA6A0AVT1 1052 aaPredicted RBP13.71□□□□□ -0.21
VCP-207ENST00000493886 TYW5A2RUC4 315 aaKnown RBP13.71□□□□□ -0.21
VCP-207ENST00000493886 TRPC5OSA6NMA1 111 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 ANKRD66B4E2M5 251 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 CSF2RAP15509 400 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 ZNF37AP17032 561 aaPredicted RBP13.71□□□□□ -0.21
VCP-207ENST00000493886 LPOP22079 712 aaPredicted RBP13.71□□□□□ -0.21
VCP-207ENST00000493886 PSMA3P25788 255 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 ITGB8P26012 769 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 TRAF2Q12933 501 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 PABPC1LQ4VXU2 614 aaKnown RBP13.71□□□□□ -0.21
VCP-207ENST00000493886 ARPINQ7Z6K5 226 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 APLFQ8IW19 511 aaPredicted RBP13.71□□□□□ -0.21
VCP-207ENST00000493886 GALNT4Q8N4A0 578 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 ZFAND2BQ8WV99 257 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 SLC39A3Q9BRY0 314 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 RTKNQ9BST9 563 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 POPDC3Q9HBV1 291 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 EML4Q9HC35 981 aaKnown RBP13.71□□□□□ -0.21
VCP-207ENST00000493886 AASDHPPTQ9NRN7 309 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 LHX3Q9UBR4 397 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 APPL1Q9UKG1 709 aa13.71□□□□□ -0.21
VCP-207ENST00000493886 PFDN1O60925 122 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 OLFM2O95897 454 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 MT-CO1P00395 513 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 PPARGP37231 505 aaPredicted RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 DPP6P42658 865 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 PDAP1Q13442 181 aaKnown RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 TLR1Q15399 786 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 INO80DQ53TQ3 878 aaPredicted RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 NCEH1Q6PIU2 408 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 Q6ZNB5 142 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 NCCRP1Q6ZVX7 275 aaPredicted RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 ADGRG6Q86SQ4 1221 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 RYBPQ8N488 228 aaPredicted RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 CPSF7Q8N684 471 aaKnown RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 KYQ8NBH2 561 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 TTC16Q8NEE8 873 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 BHLHE22Q8NFJ8 381 aaPredicted RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 DCUN1D1Q96GG9 259 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 CENPKQ9BS16 269 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 ZNF385DQ9H6B1 395 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 TRPV5Q9NQA5 729 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 GFRA2O00451 464 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 SDHDO14521 159 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 ATP6V1B1P15313 513 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 IMPDH1P20839 514 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 CSKP41240 450 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 MS4A2Q01362 244 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 CDH18Q13634 790 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 PAOXQ6QHF9 649 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 BNC2Q6ZN30 1099 aaPredicted RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 CUZD1Q86UP6 607 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 PQLC1Q8N2U9 271 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 EFHBQ8N7U6 833 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 WFDC5Q8TCV5 224 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 LPGAT1Q92604 370 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 BHMTQ93088 406 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 NMD3Q96D46 503 aaKnown RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 MAELQ96JY0 434 aaKnown RBP13.7□□□□□ -0.22
VCP-207ENST00000493886 CNBD2Q96M20 576 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 VCX3BQ9H321 246 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.7□□□□□ -0.22
VCP-207ENST00000493886 VPS51Q9UID3 782 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 MAFFQ9ULX9 164 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 OR51B4Q9Y5P0 310 aa13.7□□□□□ -0.22
VCP-207ENST00000493886 RGSL1A5PLK6 1076 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms