RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 HNRNPABQ99729 332 aaKnown RBP16.24■□□□□ 0.19
BRAT1-206ENST00000493232 MCMBPQ9BTE3 642 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 SEZ6LQ9BYH1 1024 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 RHOBTB2Q9BYZ6 727 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 LRRC4CQ9HCJ2 640 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 A0A1W2PPM1 405 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 STK16O75716 305 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 L1CAMP32004 1257 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 SLC26A3P40879 764 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 KIR3DL1P43629 444 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 CCNIQ14094 377 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 PLD5Q8N7P1 536 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 ACAT2Q9BWD1 397 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 ABCG4Q9H172 646 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 SLC25A51Q9H1U9 297 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 MAFBQ9Y5Q3 323 aaPredicted RBP16.24■□□□□ 0.19
BRAT1-206ENST00000493232 FAM86C2PA6NEL3 165 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 ITPKAP23677 461 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 S100GP29377 79 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 DPYSQ14117 519 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 CCNYL2Q5T2Q4 361 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 OAFQ86UD1 273 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 PEX5LQ8IYB4 626 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 PIK3C3Q8NEB9 887 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 S100ZQ8WXG8 99 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 EVLQ9UI08 416 aaPredicted RBP16.24■□□□□ 0.19
BRAT1-206ENST00000493232 VIPP01282 170 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 CHRNGP07510 517 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 TGFBR2P37173 567 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 CAPGP40121 348 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 OMPP47874 163 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 PPIGQ13427 754 aaKnown RBP eCLIP16.24■□□□□ 0.191e-7■■■□□ 16.2
BRAT1-206ENST00000493232 SF1Q15637 639 aaKnown RBP16.24■□□□□ 0.19
BRAT1-206ENST00000493232 ATAT1Q5SQI0 421 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 TMPRSS11BQ86T26 416 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 FAM98AQ8NCA5 519 aaKnown RBP16.24■□□□□ 0.19
BRAT1-206ENST00000493232 FAXDC2Q96IV6 333 aa16.24■□□□□ 0.19
BRAT1-206ENST00000493232 SPATA31D3P0C874 917 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 RGS21Q2M5E4 152 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 PRR23CQ6ZRP0 262 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 SPATA31D4Q6ZUB0 917 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 PTCHD4Q6ZW05 846 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 NPAS4Q8IUM7 802 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 C2orf15Q8WU43 125 aaKnown RBP16.23■□□□□ 0.19
BRAT1-206ENST00000493232 ELL3Q9HB65 397 aaPredicted RBP16.23■□□□□ 0.19
BRAT1-206ENST00000493232 ZDHHC4Q9NPG8 344 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 MIOSQ9NXC5 875 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 MTRRQ9UBK8 725 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 HAT1O14929 419 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 TOP3BO95985 862 aaKnown RBP16.23■□□□□ 0.19
BRAT1-206ENST00000493232 IGFALSP35858 605 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 PBX1P40424 430 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 SEMA5AQ13591 1074 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 LPIN1Q14693 890 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 GET4Q7L5D6 327 aaPredicted RBP16.23■□□□□ 0.19
BRAT1-206ENST00000493232 OTOP3Q7RTS5 596 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 TMC8Q8IU68 726 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 RAD51AP1Q96B01 352 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 PLD4Q96BZ4 506 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 MECRQ9BV79 373 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 PACSIN3Q9UKS6 424 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 MRPS7Q9Y2R9 242 aaKnown RBP16.23■□□□□ 0.19
BRAT1-206ENST00000493232 TREHO43280 583 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 UGT2B11O75310 529 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 PSMD8P48556 350 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 NDST2P52849 883 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 OLR1P78380 273 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 GNA12Q03113 381 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 SLC20A2Q08357 652 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 ITGADQ13349 1161 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 DLG2Q15700 870 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 FUT10Q6P4F1 479 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 OR10H5Q8NGA6 315 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 ZNF563Q8TA94 476 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 APOLD1Q96LR9 279 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 SLC9A7Q96T83 725 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 SLCO1B3Q9NPD5 702 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 MBD2Q9UBB5 411 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 OGDHLQ9ULD0 1010 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 LRCH4O75427 683 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 OR4Q2P0C623 313 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 ADSLP30566 484 aaPredicted RBP16.23■□□□□ 0.19
BRAT1-206ENST00000493232 USP4Q13107 963 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 BEND5Q7L4P6 421 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.23■□□□□ 0.19
BRAT1-206ENST00000493232 C1orf127Q8N9H9 656 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 FAM83DQ9H4H8 585 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 CLK4Q9HAZ1 481 aaKnown RBP16.23■□□□□ 0.19
BRAT1-206ENST00000493232 SLC17A7Q9P2U7 560 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 ABHD14A-ACY1A0A1B0GW23 586 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 G3V2T6 193 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 CLDN9O95484 217 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 DBTP11182 482 aaKnown RBP16.23■□□□□ 0.19
BRAT1-206ENST00000493232 ELNP15502 786 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 MBTD1Q05BQ5 628 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 KCNA10Q16322 511 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 MFSD5Q6N075 450 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 PSRC1Q6PGN9 363 aaPredicted RBP16.23■□□□□ 0.19
BRAT1-206ENST00000493232 GALNT13Q8IUC8 556 aa16.23■□□□□ 0.19
BRAT1-206ENST00000493232 DNAJC28Q9NX36 388 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms