RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 DEFB133Q30KQ1 61 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 CCDC137Q6PK04 289 aaKnown RBP12.69□□□□□ -0.38
CLIP2-209ENST00000493166 FAM151BQ6UXP7 276 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 GKN2Q86XP6 184 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 DNAAF3Q8N9W5 541 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 OR4K2Q8NGD2 314 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 OR52K1Q8NGK4 314 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 GRK7Q8WTQ7 553 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 CLPBQ9H078 707 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 PIH1D1Q9NWS0 290 aaKnown RBP12.69□□□□□ -0.38
CLIP2-209ENST00000493166 CNOT6Q9ULM6 557 aaKnown RBP12.69□□□□□ -0.38
CLIP2-209ENST00000493166 SUFUQ9UMX1 484 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 SLC17A4Q9Y2C5 497 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 TMEM98Q9Y2Y6 226 aa12.69□□□□□ -0.38
CLIP2-209ENST00000493166 GLYATL1P3A0A0U1RQE8 302 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 TPP1O14773 563 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 SUN1O94901 812 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 SLC25A14O95258 325 aaPredicted RBP12.68□□□□□ -0.38
CLIP2-209ENST00000493166 KRT14P02533 472 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 FTH1P19P0C7X4 201 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 GIMD1P0DJR0 217 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 TPH1P17752 444 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 FNTAP49354 379 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 VPS41P49754 854 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 DAB2P98082 770 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 CDH17Q12864 832 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 MSLNQ13421 630 aaPredicted RBP12.68□□□□□ -0.38
CLIP2-209ENST00000493166 SEPT6Q14141 434 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 PTPRCAPQ14761 206 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 POU6F1Q14863 301 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 TRIP13Q15645 432 aaPredicted RBP12.68□□□□□ -0.38
CLIP2-209ENST00000493166 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 N4BP2L1Q5TBK1 243 aaPredicted RBP12.68□□□□□ -0.38
CLIP2-209ENST00000493166 ZCCHC8Q6NZY4 707 aaKnown RBP12.68□□□□□ -0.38
CLIP2-209ENST00000493166 MARK2Q7KZI7 788 aaKnown RBP12.68□□□□□ -0.38
CLIP2-209ENST00000493166 GALNT13Q8IUC8 556 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 PHYKPLQ8IUZ5 450 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 SDR16C5Q8N3Y7 309 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 PTCD2Q8WV60 388 aaKnown RBP12.68□□□□□ -0.38
CLIP2-209ENST00000493166 SCG3Q8WXD2 468 aaKnown RBP12.68□□□□□ -0.38
CLIP2-209ENST00000493166 GLYATL1Q969I3 302 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 TMEM168Q9H0V1 697 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 ARFGAP3Q9NP61 516 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 IL26Q9NPH9 171 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 EIF2B3Q9NR50 452 aaKnown RBP12.68□□□□□ -0.38
CLIP2-209ENST00000493166 EVA1BQ9NVM1 165 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 VPS18Q9P253 973 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 APOBEC2Q9Y235 224 aaKnown RBP12.68□□□□□ -0.38
CLIP2-209ENST00000493166 OAS3Q9Y6K5 1087 aaKnown RBP12.68□□□□□ -0.38
CLIP2-209ENST00000493166 PIKFYVEQ9Y2I7 2098 aa12.68□□□□□ -0.38
CLIP2-209ENST00000493166 YY2O15391 372 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 LDB2O43679 373 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 PRAMEF1O95521 474 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 FUCA1P04066 466 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 CASQ1P31415 396 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 HADHAP40939 763 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 PAFAH1B1P43034 410 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 ZNF140P52738 457 aaPredicted RBP12.67□□□□□ -0.38
CLIP2-209ENST00000493166 ETF1P62495 437 aaKnown RBP12.67□□□□□ -0.38
CLIP2-209ENST00000493166 TMPRSS15P98073 1019 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 ILF3Q12906 894 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLIP2-209ENST00000493166 GPS1Q13098 491 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 DNAJC3Q13217 504 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 ITGA9Q13797 1035 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 CHRNA6Q15825 494 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 KCTD19Q17RG1 926 aaPredicted RBP12.67□□□□□ -0.38
CLIP2-209ENST00000493166 ATP13A5Q4VNC0 1218 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 CCDC157Q569K6 752 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 C6orf132Q5T0Z8 1188 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 LVRNQ6Q4G3 990 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 TAF8Q7Z7C8 310 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 CREG2Q8IUH2 290 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 FAM181AQ8N9Y4 354 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 OR13C4Q8NGS5 318 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 GDAP1Q8TB36 358 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 DTX3LQ8TDB6 740 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 GLMNQ92990 594 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 APOLD1Q96LR9 279 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 VPS35Q96QK1 796 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 OR2M4Q96R27 311 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 GSDMCQ9BYG8 508 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 TRNAU1APQ9NX07 287 aaKnown RBP12.67□□□□□ -0.38
CLIP2-209ENST00000493166 ZNHIT2Q9UHR6 403 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 FKBPLQ9UIM3 349 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 APPL1Q9UKG1 709 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 GPSM3Q9Y4H4 160 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 KCTD3Q9Y597 815 aa12.67□□□□□ -0.38
CLIP2-209ENST00000493166 RP1P56715 2156 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.66□□□□□ -0.38
CLIP2-209ENST00000493166 MED19A0JLT2 244 aaPredicted RBP12.66□□□□□ -0.38
CLIP2-209ENST00000493166 FANCGO15287 622 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 ECEL1O95672 775 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 CKMT2P17540 419 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 TPSB2P20231 275 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 ADCY8P40145 1251 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 GRIA1P42261 906 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 TERF1P54274 439 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 LAMB3Q13751 1172 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 PPP1R7Q15435 360 aa12.66□□□□□ -0.38
CLIP2-209ENST00000493166 TPSAB1Q15661 275 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms