RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZNF350Q9GZX5 532 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 RNF208Q9H0X6 261 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CDT1Q9H211 546 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 ADAM7Q9H2U9 754 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 TMEM245Q9H330 911 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 OR51B6Q9H340 312 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 FBXO44Q9H4M3 255 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SLC32A1Q9H598 525 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 MMP25Q9NPA2 562 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PIH1D3Q9NQM4 214 aaKnown RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 G6PC2Q9NQR9 355 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PNPLA3Q9NST1 481 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SACM1LQ9NTJ5 587 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 RIC8BQ9NVN3 520 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 ERVK-18Q9QC07 812 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 TRPC4Q9UBN4 977 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 DKK4Q9UBT3 224 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 TRMT6Q9UJA5 497 aaKnown RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 DAPP1Q9UN19 280 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 GINS2Q9Y248 185 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 IFT52Q9Y366 437 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 EMC9Q9Y3B6 208 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PLEKHM1Q9Y4G2 1056 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 UBE4BO95155 1302 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 ADGRF5Q8IZF2 1346 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CDHR2Q9BYE9 1310 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 IBTKQ9P2D0 1353 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 A0A087WZ62 844 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 A0A0A6YYC8 382 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 RAB19A4D1S5 217 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 HELTA6NFD8 242 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 CFAP73A6NFT4 308 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 CLCA1A8K7I4 914 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 BTBD18B2RXH4 712 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 I3L1I5 382 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF701M0R085 212 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 LIN7AO14910 233 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 INPPL1O15357 1258 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 TBX19O60806 448 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 MITFO75030 526 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 ATP9AO75110 1047 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 GPR32O75388 356 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SASH3O75995 380 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 CRYZL1O95825 349 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 B3GALT4O96024 378 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 EIF2S1P05198 315 aaKnown RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 CHRM5P08912 532 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 GSTA2P09210 222 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 CD3GP09693 182 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 TFPTP0C1Z6 253 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 H2AFB2P0C5Z0 115 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 COX5BP10606 129 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 TYRP14679 529 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 AREGP15514 252 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 NPPBP16860 134 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 G0S2P27469 103 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 CCND3P30281 292 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 IFNA8P32881 189 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 PBX3P40426 434 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SLC1A3P43003 542 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SLC1A4P43007 532 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 GSTM5P46439 218 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 CSNK1DP48730 415 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 CDC34P49427 236 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 CDH8P55286 799 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SNU13P55769 128 aaKnown RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 MAT1AQ00266 395 aaKnown RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SP2Q02086 613 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 TROAPQ12815 778 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 AIMP2Q13155 320 aaKnown RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 PPIGQ13427 754 aaKnown RBP eCLIP4.2□□□□□ -1.742e-6■■■■□ 20.9
BRCA1-220ENST00000492859 DGCR6Q14129 220 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 IL11RAQ14626 422 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 PRKD1Q15139 912 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 MOGAT2Q3SYC2 334 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 GRAMD4Q6IC98 578 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 ANO7Q6IWH7 933 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 C1orf94Q6P1W5 598 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 NHLRC1Q6VVB1 395 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 WDR88Q6ZMY6 472 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 C15orf39Q6ZRI6 1047 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 FRMD7Q6ZUT3 714 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 TOM1L2Q6ZVM7 507 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 KLHL7Q8IXQ5 586 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 TMEM192Q8IY95 271 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SELENOHQ8IZQ5 122 aaKnown RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 COMMD1Q8N668 190 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 RASGEF1AQ8N9B8 481 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 DAGLBQ8NCG7 672 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 GALNT11Q8NCW6 608 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 OR5T1Q8NG75 326 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SELENOMQ8WWX9 145 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 ROBO4Q8WZ75 1007 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 PMEPA1Q969W9 287 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 EAF2Q96CJ1 260 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 TMCO6Q96DC7 493 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 DUS3LQ96G46 650 aaKnown RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 RMND5BQ96G75 393 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SLC35A4Q96G79 324 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms