RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 TUBB3Q13509 450 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 PTPRRQ15256 657 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 LLGL1Q15334 1064 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 CDO1Q16878 200 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 CACHD1Q5VU97 1274 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 LYPLAL1Q5VWZ2 237 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 KRBA2Q6ZNG9 492 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 MED25Q71SY5 747 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 CHST15Q7LFX5 561 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 NXPE1Q8N323 547 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 ARFGAP1Q8N6T3 406 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 TMEM102Q8N9M5 508 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 TSEN2Q8NCE0 465 aaKnown RBP13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 MR1Q95460 341 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 PDFQ9HBH1 243 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 PDE7BQ9NP56 450 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 CPNE7Q9UBL6 633 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 ZNHIT2Q9UHR6 403 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 TMEM59LQ9UK28 342 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 RCOR1Q9UKL0 485 aa13.52□□□□□ -0.25
EXOSC3-207ENST00000490516 UBXN7O94888 489 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 FOLR1P15328 257 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 TEAD1P28347 426 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 HTR1EP28566 365 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 CA5AP35218 305 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 KRT9P35527 623 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 SCNN1AP37088 669 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 GPR1P46091 355 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 GABRB2P47870 512 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 VAV2P52735 878 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 APBA1Q02410 837 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 LRRC63Q05C16 580 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 ATP1A4Q13733 1029 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 KCNAB1Q14722 419 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 C15orf59Q2T9L4 293 aaPredicted RBP13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 LCN10Q6JVE6 187 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 RFLNAQ6ZTI6 216 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 FAM92BQ6ZTR7 304 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 PRSS42Q7Z5A4 293 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 PYROXD2Q8N2H3 581 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 ZBTB2Q8N680 514 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 CCDC185Q8N715 623 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 EMC1Q8N766 993 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 RTL3Q8N8U3 475 aaKnown RBP13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 ITLN2Q8WWU7 325 aaPredicted RBP13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 KLHL6Q8WZ60 621 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 SHC3Q92529 594 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 C18orf8Q96DM3 657 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 HERPUD2Q9BSE4 406 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 CD84Q9UIB8 345 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 RARRES3Q9UL19 164 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 SNX7Q9UNH6 387 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 CCDC88CQ9P219 2028 aa13.51□□□□□ -0.25
EXOSC3-207ENST00000490516 A0A0U1RQS6 177 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 A0A1B0GUH1 482 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 NEFLP07196 543 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 STSP08842 583 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 F3P13726 295 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 AMD1P17707 334 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 NELFEP18615 380 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 LHCGRP22888 699 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 VIPR1P32241 457 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 CSNK1DP48730 415 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 YBEYP58557 167 aaPredicted RBP13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 PDE1BQ01064 536 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 GPS2Q13227 327 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 IZUMO3Q5VZ72 239 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 ENOSF1Q7L5Y1 443 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 ENDOVQ8N8Q3 282 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 RSC1A1Q92681 617 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 CHST8Q9H2A9 424 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 KCTD5Q9NXV2 234 aa13.5□□□□□ -0.25
EXOSC3-207ENST00000490516 KIR2DS5A0A0G2JLQ3 304 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 A0A0G2JNG1 304 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 TTC24A2A3L6 582 aaPredicted RBP13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 KIR2DS3K7RE56 304 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 DNAJC6O75061 913 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 ASMTLO95671 621 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 ACP5P13686 325 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 EPHB2P29323 1055 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 RRADP55042 308 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 UBE2IP63279 158 aaKnown RBP13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 KIR2DS5Q14953 304 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 ZNF630Q2M218 657 aaPredicted RBP13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 PARP15Q460N3 678 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 ZNF658Q5TYW1 1059 aaPredicted RBP13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 IGFL3Q6UXB1 125 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 ADAMTSL4Q6UY14 1074 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 BNC2Q6ZN30 1099 aaPredicted RBP13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 Q6ZS92 163 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 TMEM26Q6ZUK4 368 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 PARP9Q8IXQ6 854 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 LZTR1Q8N653 840 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 GRHL3Q8TE85 626 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 NANOS1Q8WY41 292 aaKnown RBP13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 SGSM3Q96HU1 749 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 FCRL4Q96PJ5 515 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 PLEKHG4BQ96PX9 1271 aa13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 ZBTB20Q9HC78 741 aaPredicted RBP13.49□□□□□ -0.25
EXOSC3-207ENST00000490516 CHST11Q9NPF2 352 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms