RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 SMC6Q96SB8 1091 aa4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 GAD1Q99259 594 aa4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 SDF4Q9BRK5 362 aa4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 SRSF8Q9BRL6 282 aaKnown RBP4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 DDX31Q9H8H2 851 aaKnown RBP4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 PCDH9Q9HC56 1237 aa4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 LTB4R2Q9NPC1 389 aa4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 MTMR10Q9NXD2 777 aa4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 ACSL5Q9ULC5 683 aa4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 PADI1Q9ULC6 663 aa4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 MTMR6Q9Y217 621 aa4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 KLHL20Q9Y2M5 609 aa4.42□□□□□ -1.7
PRPF4B-207ENST00000490399 ARHGEF40Q8TER5 1519 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 SMCHD1A6NHR9 2005 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 TULP2O00295 520 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 MYOD1P15172 320 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 CDH2P19022 906 aaPredicted RBP4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 ANXA7P20073 488 aaKnown RBP4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 UBA1P22314 1058 aaKnown RBP4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 HOXC9P31274 260 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 RALBP1Q15311 655 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 ADIPOQQ15848 244 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 DECR1Q16698 335 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 ASTE1Q2TB18 679 aaPredicted RBP4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 KLHL22Q53GT1 634 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 ZNF805Q5CZA5 627 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 HYIQ5T013 277 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 DCST1Q5T197 706 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 FAM205BPQ63HN1 556 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 FRG2Q64ET8 278 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 SPSB3Q6PJ21 355 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 GFRALQ6UXV0 394 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 RAD9BQ6WBX8 426 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 HM13Q8TCT9 377 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 SGCDQ92629 289 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 FAM84BQ96KN1 310 aaPredicted RBP4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 IL17FQ96PD4 163 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 ZNF385AQ96PM9 386 aaKnown RBP4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 PLK3Q9H4B4 646 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 RETREG1Q9H6L5 497 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 TBC1D22BQ9NU19 505 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 MCM9Q9NXL9 1143 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 CWC15Q9P013 229 aaKnown RBP4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 SESN1Q9Y6P5 492 aa4.41□□□□□ -1.7
PRPF4B-207ENST00000490399 WDR81Q562E7 1941 aa4.4□□□□□ -1.7
PRPF4B-207ENST00000490399 TCF20Q9UGU0 1960 aaKnown RBP4.4□□□□□ -1.7
PRPF4B-207ENST00000490399 A8MZ25 164 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 PRAC2D3DTV9 90 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 VILLO15195 856 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 PLPP2O43688 288 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 HLA-DOBP13765 273 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 GABRB1P18505 474 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 PRCPP42785 496 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 DRG2P55039 364 aaKnown RBP4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 CLDN20P56880 219 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 PRAMEP78395 509 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 ECT2LQ008S8 904 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 MAD2L1Q13257 205 aaPredicted RBP4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 NSUN5P2Q63ZY6 315 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 C18orf63Q68DL7 685 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 ITPRIPL1Q6GPH6 555 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 FAM122CQ6P4D5 195 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 TMEM154Q6P9G4 183 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 BRAT1Q6PJG6 821 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 SARM1Q6SZW1 724 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 TMEM219Q86XT9 240 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 C1orf87Q8N0U7 546 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 RASGEF1CQ8N431 466 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 RBMXL3Q8N7X1 1067 aaKnown RBP4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 OR1J2Q8NGS2 313 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 SLC44A1Q8WWI5 657 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 SORCS1Q8WY21 1168 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 OR2A14Q96R47 310 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 SEPT5Q99719 369 aaPredicted RBP4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 GHITMQ9H3K2 345 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 HAUS2Q9NVX0 235 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 FBXL17Q9UF56 701 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 ZNF215Q9UL58 517 aaPredicted RBP4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 VDAC3Q9Y277 283 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 OR2W1Q9Y3N9 320 aa4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 LAS1LQ9Y4W2 734 aaKnown RBP4.4□□□□□ -1.71
PRPF4B-207ENST00000490399 IGHV4OR15-8A0A075B7B6 117 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 DENND3A2RUS2 1198 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 A6NCN8 305 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 GOLGA6L9A6NEM1 432 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 EIF4E1BA6NMX2 242 aaKnown RBP4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 SCAMP1O15126 338 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 GJB3O75712 270 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 RB1P06400 928 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 SNRNP70P08621 437 aaKnown RBP4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 CAMPP49913 170 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 ERVFC1-1P60608 527 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 MRPS34P82930 218 aaKnown RBP4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 COG7P83436 770 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 ZBED6P86452 979 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 ACSM2AQ08AH3 577 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 IKQ13123 557 aaPredicted RBP4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 IRF3Q14653 427 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 CRYMQ14894 314 aa4.39□□□□□ -1.71
PRPF4B-207ENST00000490399 SOWAHCQ53LP3 525 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms