RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	WDR24	Q96S15	920 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	CARD9	Q9H257	536 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	VPS18	Q9P253	973 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	CNOT6	Q9ULM6	557 aa	Known RBP	11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	PPP2R2C	Q9Y2T4	447 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	TCRBV7S2A1N4T	A0A589	114 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	FADS2P1	A8MWK0	482 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772		B4DGG1	531 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	AGT	P01019	485 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	ATP1A1	P05023	1023 aa	Known RBP	11	□□□□□ -0.65
GGA1-222	ENST00000489772	BPI	P17213	487 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	ADCY8	P40145	1251 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	CTBS	Q01459	385 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	PARP6	Q2NL67	630 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	PYCR3	Q53H96	274 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	CDCP2	Q5VXM1	449 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	OGFOD3	Q6PK18	319 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	SLC13A5	Q86YT5	568 aa	Predicted RBP	11	□□□□□ -0.65
GGA1-222	ENST00000489772	DCBLD1	Q8N8Z6	715 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	GPR156	Q8NFN8	814 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	WDR48	Q8TAF3	677 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	SLC35B2	Q8TB61	432 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11	□□□□□ -0.65
GGA1-222	ENST00000489772	MARVELD3	Q96A59	401 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	PLEKHG4B	Q96PX9	1271 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	DEPDC7	Q96QD5	511 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	OR2M4	Q96R27	311 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	CCDC3	Q9BQI4	270 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	GORASP1	Q9BQQ3	440 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	TMEM121	Q9BTD3	319 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	FICD	Q9BVA6	458 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	CCDC86	Q9H6F5	360 aa	Known RBP	11	□□□□□ -0.65
GGA1-222	ENST00000489772	RMI1	Q9H9A7	625 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	BPIFA1	Q9NP55	256 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	TAAR2	Q9P1P5	351 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	PKP3	Q9Y446	797 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	IGF2R	P11717	2491 aa		11	□□□□□ -0.65
GGA1-222	ENST00000489772	TRABD2B	A6NFA1	517 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	PPFIA2	O75334	1257 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	SLC25A14	O95258	325 aa	Predicted RBP	10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	GLB1	P16278	677 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	AK4	P27144	223 aa	Predicted RBP	10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	STIP1	P31948	543 aa	Known RBP	10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	CAMK2B	Q13554	666 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	P3H1	Q32P28	736 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	C14orf28	Q4W4Y0	310 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	PERM1	Q5SV97	790 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	SLC30A9	Q6PML9	568 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	RANBP10	Q6VN20	620 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	NRROS	Q86YC3	692 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	PHYKPL	Q8IUZ5	450 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	TTC30B	Q8N4P2	665 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	ZDHHC1	Q8WTX9	485 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	GLYATL1	Q969I3	302 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	CCDC74A	Q96AQ1	378 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	TRIM39	Q9HCM9	518 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	SPATS2L	Q9NUQ6	558 aa	Known RBP	10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	ZNHIT2	Q9UHR6	403 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	OAS3	Q9Y6K5	1087 aa	Known RBP	10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	ANKRD36	A6QL64	1941 aa		10.99	□□□□□ -0.65
GGA1-222	ENST00000489772	C2orf81	A6NN90	581 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	GPR89A	B7ZAQ6	455 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	GRID2	O43424	1007 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	LIAS	O43766	372 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	NUDT21	O43809	227 aa	Known RBP	10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	NOBOX	O60393	691 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	DNAJC6	O75061	913 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	TCEA3	O75764	348 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	GPR89B	P0CG08	455 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	PNLIP	P16233	465 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	ADRA1A	P35348	466 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	SPAM1	P38567	509 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	ACTR1B	P42025	376 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	GDF10	P55107	478 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	ACTR1A	P61163	376 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	PDE1B	Q01064	536 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	BIRC2	Q13490	618 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	CERCAM	Q5T4B2	595 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	RBM44	Q6ZP01	1051 aa	Known RBP	10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	DTX3L	Q8TDB6	740 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	ATG4A	Q8WYN0	398 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	NXPE2	Q96DL1	559 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	TBL1Y	Q9BQ87	522 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	APOL2	Q9BQE5	337 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	OR2AG1	Q9H205	316 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	SYNDIG1	Q9H7V2	258 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	LRRC40	Q9H9A6	602 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	IL26	Q9NPH9	171 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	IL17C	Q9P0M4	197 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	LRIT1	Q9P2V4	623 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	APPL1	Q9UKG1	709 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	ZMIZ1	Q9ULJ6	1067 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	ZNF148	Q9UQR1	794 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	PLEKHM1	Q9Y4G2	1056 aa		10.98	□□□□□ -0.65
GGA1-222	ENST00000489772	TP53BP1	Q12888	1972 aa	Predicted RBP	10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms