RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 SDC3O75056 442 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 ZSCAN5DPP0CG00 497 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 CTSEP14091 401 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 ETS1P14921 441 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 GPS1Q13098 491 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 ILKQ13418 452 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 SPARCL1Q14515 664 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 TRIP6Q15654 476 aaKnown RBP10.99□□□□□ -0.65
CPSF7-212ENST00000489728 ZNF542PQ5EBM4 170 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 PRRT3Q5FWE3 981 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 PPM1JQ5JR12 505 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 LDLRAP1Q5SW96 308 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 ALS2CLQ60I27 953 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 PSAPL1Q6NUJ1 521 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 GATAD2AQ86YP4 633 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 HID1Q8IV36 788 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 DEFB124Q8NES8 71 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 OR52K1Q8NGK4 314 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 LMX1AQ8TE12 382 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 STYXQ8WUJ0 223 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 PTCD2Q8WV60 388 aaKnown RBP10.99□□□□□ -0.65
CPSF7-212ENST00000489728 GLMNQ92990 594 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 TSACCQ96A04 125 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-212ENST00000489728 AGAP2Q99490 1192 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 IL22Q9GZX6 179 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 TRIM39Q9HCM9 518 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 NLE1Q9NVX2 485 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-212ENST00000489728 UCKL1Q9NWZ5 548 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 SMARCAL1Q9NZC9 954 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 PNMA8BQ9ULN7 279 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-212ENST00000489728 BTBD3Q9Y2F9 522 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 PCDHGA1Q9Y5H4 931 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 ARL5AQ9Y689 179 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 CACNA1AO00555 2505 aa10.99□□□□□ -0.65
CPSF7-212ENST00000489728 DCDC2BA2VCK2 349 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 KLHL33A6NCF5 533 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 AGAP14A8MT82 685 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 GAPDHSO14556 408 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-212ENST00000489728 NDC80O14777 642 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 SLC25A14O95258 325 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-212ENST00000489728 TRIM16O95361 564 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 PRAMEF1O95521 474 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 LDOC1O95751 146 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-212ENST00000489728 ANXA6P08133 673 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 GIMD1P0DJR0 217 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 MLNP12872 115 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 ADRA1DP25100 572 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 NPY2RP49146 381 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 RPIAP49247 311 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 DUSP3P51452 185 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-212ENST00000489728 ILF3Q12906 894 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■■□ 21.5
CPSF7-212ENST00000489728 NFATC2Q13469 925 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 OLIG2Q13516 323 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 PTK6Q13882 451 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 DHX34Q14147 1143 aaKnown RBP10.98□□□□□ -0.65
CPSF7-212ENST00000489728 KCNJ11Q14654 390 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 PPP1R7Q15435 360 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 SKIDA1Q1XH10 827 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 PROX2Q3B8N5 592 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 GPR33Q49SQ1 333 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 ATP13A5Q4VNC0 1218 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 C6orf132Q5T0Z8 1188 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 SYT10Q6XYQ8 523 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 PCGF5Q86SE9 256 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 GALNT13Q8IUC8 556 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 RBFAQ8N0V3 343 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 C17orf53Q8N3J3 647 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-212ENST00000489728 EID2Q8N6I1 236 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 MCUQ8NE86 351 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 DDHD1Q8NEL9 900 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 OR4K2Q8NGD2 314 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 GPBAR1Q8TDU6 330 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 HEXDCQ8WVB3 486 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 ULK4Q96C45 1275 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 SGSM3Q96HU1 749 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 CAPZA3Q96KX2 299 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 OR2M4Q96R27 311 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 GSDMCQ9BYG8 508 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 CARS2Q9HA77 564 aaKnown RBP10.98□□□□□ -0.65
CPSF7-212ENST00000489728 CYP4F12Q9HCS2 524 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 XAB2Q9HCS7 855 aaKnown RBP10.98□□□□□ -0.65
CPSF7-212ENST00000489728 BPIFA1Q9NP55 256 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 APOBEC2Q9Y235 224 aaKnown RBP10.98□□□□□ -0.65
CPSF7-212ENST00000489728 BPTFQ12830 3046 aa10.98□□□□□ -0.65
CPSF7-212ENST00000489728 SMAPO00193 183 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 CHUKO15111 745 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 INPP4BO15327 924 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 SIGLEC6O43699 453 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 NUAK1O60285 661 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 DNAJC6O75061 913 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 SRP72O76094 671 aaKnown RBP10.97□□□□□ -0.65
CPSF7-212ENST00000489728 DKK1O94907 266 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 GP1BAP07359 652 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 CKMT1AP12532 417 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 CKMT2P17540 419 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 ITGALP20701 1170 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 ACP1P24666 158 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 CLCNKAP51800 687 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 XIAPP98170 497 aa10.97□□□□□ -0.65
CPSF7-212ENST00000489728 FOXK2Q01167 660 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms