RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PIMREGQ9BSJ6 248 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 INPP5KQ9BT40 448 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 ELOVL1Q9BW60 279 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 CCSER1Q9C0I3 900 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 DPH5Q9H2P9 285 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 MMP27Q9H306 513 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 CNOT10Q9H9A5 744 aaKnown RBP3.42□□□□□ -1.86
PRPF4-203ENST00000488937 SAP30LQ9HAJ7 183 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 KIF9Q9HAQ2 790 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 SYTL2Q9HCH5 934 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 INTS13Q9NVM9 706 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 NMRK1Q9NWW6 199 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 AIPL1Q9NZN9 384 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 TRPC4Q9UBN4 977 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 UPB1Q9UBR1 384 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 CLIP2Q9UDT6 1046 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 DDX25Q9UHL0 483 aaKnown RBP3.42□□□□□ -1.86
PRPF4-203ENST00000488937 TRMT6Q9UJA5 497 aaKnown RBP3.42□□□□□ -1.86
PRPF4-203ENST00000488937 STX8Q9UNK0 236 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 ZNF148Q9UQR1 794 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 TDRKHQ9Y2W6 561 aaKnown RBP3.42□□□□□ -1.86
PRPF4-203ENST00000488937 CAB39Q9Y376 341 aaPredicted RBP3.42□□□□□ -1.86
PRPF4-203ENST00000488937 PKP3Q9Y446 797 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 XDHP47989 1333 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 SPATA31A6Q5VVP1 1343 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 ZNF541Q9H0D2 1346 aa3.42□□□□□ -1.86
PRPF4-203ENST00000488937 ARHGEF40Q8TER5 1519 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 KIAA1217Q5T5P2 1943 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 FAM237AA0A1B0GTK4 181 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 ELOVL7A1L3X0 281 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 ERICH4A6NGS2 130 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 NPIPB11E5RHQ5 1161 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 SGK1O00141 431 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 PES1O00541 588 aaKnown RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 PPP6CO00743 305 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 EIF3DO15371 548 aaKnown RBP eCLIP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 FAM20BO75063 409 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 DIRAS3O95661 229 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 C1RP00736 705 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 TGFAP01135 160 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 FGBP02675 491 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 TFP02787 698 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 KRT8P05787 483 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 RHOP08100 348 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 IRF1P10914 325 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 TOP1P11387 765 aaKnown RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 HOXB9P17482 250 aaPredicted RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 GNAT2P19087 354 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 ITIH1P19827 911 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 CCNCP24863 283 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 ADRA1DP25100 572 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 CDC25CP30307 473 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 SOAT1P35610 550 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 FRKP42685 505 aaPredicted RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 PTPN9P43378 593 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 MTIF2P46199 727 aaKnown RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 KCNJ1P48048 391 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 PITPNBP48739 271 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 CLCN3P51790 818 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 PDE1AP54750 535 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 SHC2P98077 582 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 TFAP4Q01664 338 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 DEUP1Q05D60 604 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 RBPJQ06330 500 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 CETN1Q12798 172 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 GPM6BQ13491 265 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 RIPK1Q13546 671 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 KCNC3Q14003 757 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 PTPRCAPQ14761 206 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 HLXQ14774 488 aaPredicted RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 SNAPC1Q16533 368 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 GEN1Q17RS7 908 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 TTC39AQ5SRH9 613 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 SPATA46Q5T0L3 261 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 RBM20Q5T481 1227 aaKnown RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 RIPPLY2Q5TAB7 128 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 DHRS7BQ6IAN0 325 aaPredicted RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 AADACL2Q6P093 401 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 ARHGAP11AQ6P4F7 1023 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 SLC39A5Q6ZMH5 540 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 PTCHD4Q6ZW05 846 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 PRSS45Q7RTY3 260 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 TRAPPC11Q7Z392 1133 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 SYVN1Q86TM6 617 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 NBPF5PQ86XG9 351 aaPredicted RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 KLHL7Q8IXQ5 586 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 LAS2Q8IYD9 372 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 SCYL3Q8IZE3 742 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 ADGRF3Q8IZF5 1079 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 UXS1Q8NBZ7 420 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 OR56B2PQ8NGI1 322 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 OR52M1Q8NGK5 317 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 FAM110DQ8TAY7 271 aaPredicted RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 TRPC4APQ8TEL6 797 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 SOCS4Q8WXH5 440 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 SMG7Q92540 1137 aaKnown RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 SPACA9Q96E40 222 aaPredicted RBP3.41□□□□□ -1.86
PRPF4-203ENST00000488937 CDRT15Q96T59 188 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 MNTQ99583 582 aa3.41□□□□□ -1.86
PRPF4-203ENST00000488937 WDR83Q9BRX9 315 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms